30 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_10841	Ig-like domain-containing protein. (240 aa)
	D910_11980	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (792 aa)
	D910_11309	Uncharacterized protein. (466 aa)
	D910_10839	Uncharacterized protein. (194 aa)
	D910_10840	Uncharacterized protein. (157 aa)
	D910_10231	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (606 aa)
	D910_11913	Nuclear receptor domain-containing protein. (156 aa)
	D910_09377	Uncharacterized protein. (666 aa)
	D910_09378	Uncharacterized protein. (651 aa)
	D910_12071	Uncharacterized protein. (184 aa)
	D910_11307	Uncharacterized protein. (530 aa)
	D910_10842	Uncharacterized protein. (116 aa)
	D910_11308	Uncharacterized protein. (516 aa)
	D910_11125	Uncharacterized protein. (227 aa)
	D910_09380	Uncharacterized protein. (167 aa)
	D910_09375	DUF3454 domain-containing protein. (107 aa)
	D910_06648	Uncharacterized protein. (447 aa)
	D910_09654	Uncharacterized protein. (213 aa)
	D910_09020	Uncharacterized protein. (177 aa)
	D910_09379	Uncharacterized protein. (222 aa)
	D910_09381	Uncharacterized protein. (174 aa)
	D910_09376	Uncharacterized protein. (270 aa)
	D910_04969	Uncharacterized protein. (845 aa)
	D910_03198	DUF3480 domain-containing protein. (575 aa)
	D910_03197	FYVE-type domain-containing protein. (778 aa)
	D910_02839	Uncharacterized protein. (253 aa)
	D910_02297	Uncharacterized protein. (394 aa)
	D910_10391	Homeobox domain-containing protein. (192 aa)
	D910_04642	Uncharacterized protein. (321 aa)
	D910_11914	NR LBD domain-containing protein. (205 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_03197	D910_03198	U4TY92	U4U0F6	FYVE-type domain-containing protein.	DUF3480 domain-containing protein.	0.830
D910_03198	D910_03197	U4U0F6	U4TY92	DUF3480 domain-containing protein.	FYVE-type domain-containing protein.	0.830
D910_09375	D910_11980	U4UI74	U4UWM2	DUF3454 domain-containing protein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.654
D910_09376	D910_09380	U4UDK4	U4UI78	Uncharacterized protein.	Uncharacterized protein.	0.403
D910_09376	D910_09381	U4UDK4	U4UDK9	Uncharacterized protein.	Uncharacterized protein.	0.416
D910_09376	D910_11980	U4UDK4	U4UWM2	Uncharacterized protein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.654
D910_09377	D910_09378	U4UPV2	U4UPG8	Uncharacterized protein.	Uncharacterized protein.	0.894
D910_09377	D910_09379	U4UPV2	U4UG97	Uncharacterized protein.	Uncharacterized protein.	0.838
D910_09377	D910_09380	U4UPV2	U4UI78	Uncharacterized protein.	Uncharacterized protein.	0.900
D910_09377	D910_09381	U4UPV2	U4UDK9	Uncharacterized protein.	Uncharacterized protein.	0.900
D910_09377	D910_11980	U4UPV2	U4UWM2	Uncharacterized protein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.774
D910_09378	D910_09377	U4UPG8	U4UPV2	Uncharacterized protein.	Uncharacterized protein.	0.894
D910_09378	D910_11980	U4UPG8	U4UWM2	Uncharacterized protein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.673
D910_09379	D910_09377	U4UG97	U4UPV2	Uncharacterized protein.	Uncharacterized protein.	0.838
D910_09379	D910_11980	U4UG97	U4UWM2	Uncharacterized protein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.667
D910_09380	D910_09376	U4UI78	U4UDK4	Uncharacterized protein.	Uncharacterized protein.	0.403
D910_09380	D910_09377	U4UI78	U4UPV2	Uncharacterized protein.	Uncharacterized protein.	0.900
D910_09380	D910_09381	U4UI78	U4UDK9	Uncharacterized protein.	Uncharacterized protein.	0.912
D910_09380	D910_11980	U4UI78	U4UWM2	Uncharacterized protein.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.667
D910_09381	D910_09376	U4UDK9	U4UDK4	Uncharacterized protein.	Uncharacterized protein.	0.416