7 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_00634	Integrin beta. (641 aa)
	D910_08162	Roc domain-containing protein. (384 aa)
	D910_08163	Uncharacterized protein. (260 aa)
	D910_10507	Integrin beta. (784 aa)
	D910_03947	Integrin beta. (640 aa)
	D910_08164	ANK_REP_REGION domain-containing protein. (591 aa)
	D910_01078	J domain-containing protein. (355 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00634	D910_08162	U4TQ26	U4UKX0	Integrin beta.	Roc domain-containing protein.	0.694
D910_00634	D910_08163	U4TQ26	U4UCN6	Integrin beta.	Uncharacterized protein.	0.694
D910_00634	D910_08164	U4TQ26	N6T055	Integrin beta.	ANK_REP_REGION domain-containing protein.	0.694
D910_03947	D910_08162	U4U7E5	U4UKX0	Integrin beta.	Roc domain-containing protein.	0.694
D910_03947	D910_08163	U4U7E5	U4UCN6	Integrin beta.	Uncharacterized protein.	0.694
D910_03947	D910_08164	U4U7E5	N6T055	Integrin beta.	ANK_REP_REGION domain-containing protein.	0.694
D910_08162	D910_00634	U4UKX0	U4TQ26	Roc domain-containing protein.	Integrin beta.	0.694
D910_08162	D910_03947	U4UKX0	U4U7E5	Roc domain-containing protein.	Integrin beta.	0.694
D910_08162	D910_08163	U4UKX0	U4UCN6	Roc domain-containing protein.	Uncharacterized protein.	0.999
D910_08162	D910_08164	U4UKX0	N6T055	Roc domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.999
D910_08162	D910_10507	U4UKX0	U4USQ6	Roc domain-containing protein.	Integrin beta.	0.694
D910_08163	D910_00634	U4UCN6	U4TQ26	Uncharacterized protein.	Integrin beta.	0.694
D910_08163	D910_03947	U4UCN6	U4U7E5	Uncharacterized protein.	Integrin beta.	0.694
D910_08163	D910_08162	U4UCN6	U4UKX0	Uncharacterized protein.	Roc domain-containing protein.	0.999
D910_08163	D910_08164	U4UCN6	N6T055	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.999
D910_08163	D910_10507	U4UCN6	U4USQ6	Uncharacterized protein.	Integrin beta.	0.694
D910_08164	D910_00634	N6T055	U4TQ26	ANK_REP_REGION domain-containing protein.	Integrin beta.	0.694
D910_08164	D910_03947	N6T055	U4U7E5	ANK_REP_REGION domain-containing protein.	Integrin beta.	0.694
D910_08164	D910_08162	N6T055	U4UKX0	ANK_REP_REGION domain-containing protein.	Roc domain-containing protein.	0.999
D910_08164	D910_08163	N6T055	U4UCN6	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.999