15 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_03198	DUF3480 domain-containing protein. (575 aa)
	D910_08007	Uncharacterized protein. (1168 aa)
	D910_06200	Uncharacterized protein. (365 aa)
	D910_04543	Uncharacterized protein; Belongs to the DEAD box helicase family. (426 aa)
	D910_05161	Uncharacterized protein. (489 aa)
	D910_04385	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (280 aa)
	D910_03197	FYVE-type domain-containing protein. (778 aa)
	D910_00702	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (399 aa)
	D910_02665	Endo/exonuclease/phosphatase domain-containing protein. (383 aa)
	D910_00643	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (310 aa)
	D910_01131	TPR_MLP1_2 domain-containing protein. (2339 aa)
	D910_08873	HORMA domain-containing protein. (204 aa)
	D910_03638	Uncharacterized protein. (220 aa)
	D910_10371	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	D910_05695	BRO1 domain-containing protein. (824 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00643	D910_08873	N6UL49	J3JYM0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	HORMA domain-containing protein.	0.856
D910_00643	D910_10371	N6UL49	J3JXP2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.573
D910_00702	D910_04543	U4TWH5	U4U468	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.438
D910_03197	D910_03198	U4TY92	U4U0F6	FYVE-type domain-containing protein.	DUF3480 domain-containing protein.	0.830
D910_03198	D910_03197	U4U0F6	U4TY92	DUF3480 domain-containing protein.	FYVE-type domain-containing protein.	0.830
D910_03638	D910_05695	J3JXU3	J3JTI1	Uncharacterized protein.	BRO1 domain-containing protein.	0.998
D910_04543	D910_00702	U4U468	U4TWH5	Uncharacterized protein; Belongs to the DEAD box helicase family.	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	0.438
D910_05695	D910_03638	J3JTI1	J3JXU3	BRO1 domain-containing protein.	Uncharacterized protein.	0.998
D910_08873	D910_00643	J3JYM0	N6UL49	HORMA domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.856
D910_08873	D910_10371	J3JYM0	J3JXP2	HORMA domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.761
D910_10371	D910_00643	J3JXP2	N6UL49	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.573
D910_10371	D910_08873	J3JXP2	J3JYM0	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	HORMA domain-containing protein.	0.761