27 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_02566	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	D910_04630	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	D910_08785	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (117 aa)
	D910_12499	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (152 aa)
	D910_09765	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (119 aa)
	D910_07957	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (267 aa)
	D910_07459	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	D910_02462	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (243 aa)
	D910_07792	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (150 aa)
	D910_05669	Uncharacterized protein. (131 aa)
	D910_06665	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (211 aa)
	D910_11756	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (282 aa)
	D910_11455	Ribosomal_S4 domain-containing protein; Belongs to the universal ribosomal protein uS4 family. (137 aa)
	D910_03791	40S_SA_C domain-containing protein; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits; Belongs to the universal ribosomal protein uS2 family. (310 aa)
	D910_04242	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (137 aa)
	D910_03456	Uncharacterized protein. (78 aa)
	D910_07878	40S ribosomal protein S6. (246 aa)
	D910_01957	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (144 aa)
	D910_04099	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family. (343 aa)
	D910_05690	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (134 aa)
	D910_04982	Uncharacterized protein. (310 aa)
	D910_07637	40S ribosomal protein S27. (137 aa)
	D910_10184	S10_plectin domain-containing protein. (229 aa)
	D910_10424	Ribosomal_S13_N domain-containing protein. (133 aa)
	D910_08629	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (252 aa)
	D910_10143	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (265 aa)
	D910_01573	Uncharacterized protein. (217 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_01573	D910_01957	U4UT11	U4TUS6	Uncharacterized protein.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.981
D910_01573	D910_02462	U4UT11	J3JWK7	Uncharacterized protein.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.950
D910_01573	D910_02566	U4UT11	N6TSZ6	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.981
D910_01573	D910_03456	U4UT11	N6UDG2	Uncharacterized protein.	Uncharacterized protein.	0.981
D910_01573	D910_03791	U4UT11	N6U7R0	Uncharacterized protein.	40S_SA_C domain-containing protein; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits; Belongs to the universal ribosomal protein uS2 family.	0.982
D910_01573	D910_04099	U4UT11	U4U2X7	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	0.984
D910_01573	D910_04242	U4UT11	N6UCH0	Uncharacterized protein.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.986
D910_01573	D910_04630	U4UT11	J3JTS1	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.983
D910_01573	D910_04982	U4UT11	U4UAF9	Uncharacterized protein.	Uncharacterized protein.	0.985
D910_01573	D910_05669	U4UT11	N6SYI9	Uncharacterized protein.	Uncharacterized protein.	0.986
D910_01573	D910_05690	U4UT11	U4U7H5	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.957
D910_01573	D910_06665	U4UT11	N6T8X1	Uncharacterized protein.	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	0.983
D910_01573	D910_07459	U4UT11	J3JWG7	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	0.952
D910_01573	D910_07637	U4UT11	U4UJV9	Uncharacterized protein.	40S ribosomal protein S27.	0.977
D910_01573	D910_07792	U4UT11	J3JYI1	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.984
D910_01573	D910_07878	U4UT11	N6UJK1	Uncharacterized protein.	40S ribosomal protein S6.	0.950
D910_01573	D910_07957	U4UT11	J3JWD5	Uncharacterized protein.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.985
D910_01573	D910_08785	U4UT11	J3JUB1	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.983
D910_01573	D910_09765	U4UT11	J3JVM4	Uncharacterized protein.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.982
D910_01573	D910_10184	U4UT11	U4UK90	Uncharacterized protein.	S10_plectin domain-containing protein.	0.981