43 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_02756	Uncharacterized protein. (1080 aa)
	D910_02372	Uncharacterized protein. (215 aa)
	D910_09621	Uncharacterized protein. (239 aa)
	D910_02040	IGFBP N-terminal domain-containing protein. (53 aa)
	D910_10854	Fucosidase_C domain-containing protein. (444 aa)
	D910_06982	Uncharacterized protein. (203 aa)
	D910_04428	Uncharacterized protein. (185 aa)
	D910_04482	TGF_BETA_2 domain-containing protein. (417 aa)
	D910_07248	TGF_BETA_2 domain-containing protein. (367 aa)
	D910_04701	C2 domain-containing protein. (358 aa)
	D910_03626	Uncharacterized protein. (208 aa)
	D910_11178	Uncharacterized protein. (210 aa)
	D910_12085	Uncharacterized protein. (4004 aa)
	D910_05115	DOMON domain-containing protein. (587 aa)
	D910_00239	Dihydrolipoyl dehydrogenase. (474 aa)
	D910_02037	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. (628 aa)
	D910_02759	VWFD domain-containing protein. (514 aa)
	D910_02065	TMF_TATA_bd domain-containing protein. (1250 aa)
	D910_02757	VWFD domain-containing protein. (168 aa)
	D910_03688	Uncharacterized protein. (850 aa)
	D910_02758	Uncharacterized protein. (331 aa)
	D910_05109	C3H1-type domain-containing protein. (389 aa)
	D910_04668	Uncharacterized protein. (202 aa)
	D910_00163	DOMON domain-containing protein. (438 aa)
	D910_06627	DC_STAMP domain-containing protein. (512 aa)
	D910_02760	Uncharacterized protein. (285 aa)
	D910_06184	Uncharacterized protein. (841 aa)
	D910_05973	Metallophos domain-containing protein. (290 aa)
	D910_08954	Uncharacterized protein. (738 aa)
	D910_05817	DOMON domain-containing protein. (760 aa)
	D910_05288	Uncharacterized protein. (1205 aa)
	D910_06761	Uncharacterized protein. (295 aa)
	D910_06808	Exonuclease domain-containing protein. (945 aa)
	D910_10669	Cu2_monoox_C domain-containing protein. (113 aa)
	D910_11488	Tr-type G domain-containing protein. (610 aa)
	D910_08936	Uncharacterized protein. (444 aa)
	D910_11937	Uncharacterized protein. (2377 aa)
	D910_09312	Uncharacterized protein. (243 aa)
	D910_11938	Uncharacterized protein. (254 aa)
	D910_10444	Uncharacterized protein. (881 aa)
	D910_00113	Metallophos domain-containing protein. (168 aa)
	D910_00484	C2 domain-containing protein. (222 aa)
	D910_12325	FYVE-type domain-containing protein. (242 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00113	D910_05973	U4UT28	U4U8B5	Metallophos domain-containing protein.	Metallophos domain-containing protein.	0.933
D910_00163	D910_10669	U4U2V8	U4UJU9	DOMON domain-containing protein.	Cu2_monoox_C domain-containing protein.	0.918
D910_00484	D910_11178	U4UTN3	N6UEM8	C2 domain-containing protein.	Uncharacterized protein.	0.570
D910_02372	D910_04428	J3JV86	N6UAS9	Uncharacterized protein.	Uncharacterized protein.	0.558
D910_02372	D910_06982	J3JV86	N6U250	Uncharacterized protein.	Uncharacterized protein.	0.543
D910_02756	D910_02757	U4U441	U4TX23	Uncharacterized protein.	VWFD domain-containing protein.	0.804
D910_02756	D910_02758	U4U441	U4TZB3	Uncharacterized protein.	Uncharacterized protein.	0.927
D910_02756	D910_02759	U4U441	U4TUY3	Uncharacterized protein.	VWFD domain-containing protein.	0.914
D910_02756	D910_02760	U4U441	U4U5Y2	Uncharacterized protein.	Uncharacterized protein.	0.772
D910_02757	D910_02756	U4TX23	U4U441	VWFD domain-containing protein.	Uncharacterized protein.	0.804
D910_02757	D910_02758	U4TX23	U4TZB3	VWFD domain-containing protein.	Uncharacterized protein.	0.935
D910_02757	D910_02759	U4TX23	U4TUY3	VWFD domain-containing protein.	VWFD domain-containing protein.	0.914
D910_02757	D910_02760	U4TX23	U4U5Y2	VWFD domain-containing protein.	Uncharacterized protein.	0.839
D910_02758	D910_02756	U4TZB3	U4U441	Uncharacterized protein.	Uncharacterized protein.	0.927
D910_02758	D910_02757	U4TZB3	U4TX23	Uncharacterized protein.	VWFD domain-containing protein.	0.935
D910_02758	D910_02759	U4TZB3	U4TUY3	Uncharacterized protein.	VWFD domain-containing protein.	0.929
D910_02758	D910_02760	U4TZB3	U4U5Y2	Uncharacterized protein.	Uncharacterized protein.	0.715
D910_02759	D910_02756	U4TUY3	U4U441	VWFD domain-containing protein.	Uncharacterized protein.	0.914
D910_02759	D910_02757	U4TUY3	U4TX23	VWFD domain-containing protein.	VWFD domain-containing protein.	0.914
D910_02759	D910_02758	U4TUY3	U4TZB3	VWFD domain-containing protein.	Uncharacterized protein.	0.929