43 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_00401	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (810 aa)
	D910_01975	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (157 aa)
	D910_11055	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (422 aa)
	D910_01542	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (776 aa)
	D910_12089	MFS domain-containing protein. (559 aa)
	D910_09673	Aa_trans domain-containing protein. (457 aa)
	D910_09192	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (715 aa)
	D910_08419	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (386 aa)
	D910_02277	Uncharacterized protein. (197 aa)
	D910_12207	Uncharacterized protein. (582 aa)
	D910_12117	MARVEL domain-containing protein. (209 aa)
	D910_06666	t-SNARE coiled-coil homology domain-containing protein. (156 aa)
	D910_09104	Uncharacterized protein. (371 aa)
	D910_05873	t-SNARE coiled-coil homology domain-containing protein. (216 aa)
	D910_10668	Uncharacterized protein. (85 aa)
	D910_01592	Aa_trans domain-containing protein. (159 aa)
	D910_02551	Uncharacterized protein. (1196 aa)
	D910_02556	Sec16 domain-containing protein. (1717 aa)
	D910_03006	MFS domain-containing protein. (418 aa)
	D910_00660	MFS domain-containing protein. (153 aa)
	D910_02359	MFS domain-containing protein. (535 aa)
	D910_05740	Uncharacterized protein. (269 aa)
	D910_04042	AP-1 complex subunit gamma. (996 aa)
	D910_05738	Synapsin_C domain-containing protein. (282 aa)
	D910_08309	Uncharacterized protein. (488 aa)
	D910_05976	ABC transporter domain-containing protein. (651 aa)
	D910_09468	Uncharacterized protein. (1007 aa)
	D910_11125	Uncharacterized protein. (227 aa)
	D910_11225	Uncharacterized protein. (177 aa)
	D910_11068	Uncharacterized protein. (451 aa)
	D910_11719	ABC transporter domain-containing protein. (183 aa)
	D910_11224	Uncharacterized protein. (173 aa)
	D910_12071	Uncharacterized protein. (184 aa)
	D910_09224	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	D910_11720	Uncharacterized protein. (452 aa)
	D910_12388	Uncharacterized protein. (825 aa)
	D910_10327	WD_REPEATS_REGION domain-containing protein. (994 aa)
	D910_10566	Uncharacterized protein. (1083 aa)
	D910_10657	Uncharacterized protein. (1072 aa)
	D910_00484	C2 domain-containing protein. (222 aa)
	D910_12050	Uncharacterized protein. (342 aa)
	D910_12325	FYVE-type domain-containing protein. (242 aa)
	D910_12827	Uncharacterized protein. (2129 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00401	D910_02556	U4TRT6	U4TU95	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Sec16 domain-containing protein.	0.957
D910_00401	D910_09224	U4TRT6	U4UP32	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.968
D910_00401	D910_10327	U4TRT6	U4USE8	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	WD_REPEATS_REGION domain-containing protein.	0.975
D910_00401	D910_10566	U4TRT6	U4UT33	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.984
D910_00401	D910_10657	U4TRT6	U4UTC1	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.986
D910_00401	D910_12388	U4TRT6	U4URH8	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.734
D910_00401	D910_12827	U4TRT6	U4UYT9	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.433
D910_00660	D910_03006	U4TZ37	U4TXQ2	MFS domain-containing protein.	MFS domain-containing protein.	0.947
D910_00660	D910_08309	U4TZ37	U4UD35	MFS domain-containing protein.	Uncharacterized protein.	0.741
D910_01542	D910_02556	J3JX23	U4TU95	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Sec16 domain-containing protein.	0.957
D910_01542	D910_09224	J3JX23	U4UP32	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.968
D910_01542	D910_10327	J3JX23	U4USE8	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	WD_REPEATS_REGION domain-containing protein.	0.975
D910_01542	D910_10566	J3JX23	U4UT33	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.997
D910_01542	D910_10657	J3JX23	U4UTC1	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.997
D910_01542	D910_12388	J3JX23	U4URH8	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.734
D910_01542	D910_12827	J3JX23	U4UYT9	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.433
D910_01592	D910_08309	U4TRV9	U4UD35	Aa_trans domain-containing protein.	Uncharacterized protein.	0.665
D910_01975	D910_04042	J3JU90	U4U9M5	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP-1 complex subunit gamma.	0.998
D910_01975	D910_09192	J3JU90	N6T304	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.448
D910_01975	D910_11055	J3JU90	J3JW23	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.999