37 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_12202	Uncharacterized protein. (288 aa)
	D910_06587	Uncharacterized protein. (392 aa)
	D910_11362	Uncharacterized protein; Belongs to the CD36 family. (424 aa)
	D910_02808	Uncharacterized protein. (90 aa)
	D910_04642	Uncharacterized protein. (321 aa)
	D910_11633	Uncharacterized protein; Belongs to the AAA ATPase family. (437 aa)
	D910_02828	Uncharacterized protein. (459 aa)
	D910_08935	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (243 aa)
	D910_05157	Uncharacterized protein. (188 aa)
	D910_03350	Uncharacterized protein. (60 aa)
	D910_03128	Uncharacterized protein. (1581 aa)
	D910_05367	Uncharacterized protein. (315 aa)
	D910_03371	MFS domain-containing protein. (461 aa)
	D910_03646	Uncharacterized protein. (111 aa)
	D910_09976	Uncharacterized protein; Belongs to the AAA ATPase family. (180 aa)
	D910_09554	Uncharacterized protein. (429 aa)
	D910_09870	VPS37 C-terminal domain-containing protein. (236 aa)
	D910_10828	M16C_associated domain-containing protein. (1018 aa)
	D910_09370	Uncharacterized protein. (3272 aa)
	D910_11391	Uncharacterized protein. (274 aa)
	D910_08195	Uncharacterized protein. (468 aa)
	D910_11389	Uncharacterized protein. (1320 aa)
	D910_11844	Uncharacterized protein. (833 aa)
	D910_11189	Uncharacterized protein. (735 aa)
	D910_11390	Uncharacterized protein. (359 aa)
	D910_10810	PKD_channel domain-containing protein. (552 aa)
	D910_11022	Reverse transcriptase domain-containing protein. (140 aa)
	D910_11392	Uncharacterized protein. (1037 aa)
	D910_12717	Aa_trans domain-containing protein. (378 aa)
	D910_12827	Uncharacterized protein. (2129 aa)
	D910_01001	Uncharacterized protein. (88 aa)
	D910_03933	Uncharacterized protein. (129 aa)
	D910_05810	Robl_LC7 domain-containing protein. (125 aa)
	D910_06682	Uncharacterized protein; Belongs to the synaptobrevin family. (220 aa)
	D910_11078	Protein YIPF. (321 aa)
	D910_01790	Uncharacterized protein. (124 aa)
	D910_01886	Uncharacterized protein. (539 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_01790	D910_02808	N6TPH2	N6SZC3	Uncharacterized protein.	Uncharacterized protein.	0.987
D910_01790	D910_03350	N6TPH2	N6UH29	Uncharacterized protein.	Uncharacterized protein.	0.998
D910_01790	D910_05810	N6TPH2	J3JZ49	Uncharacterized protein.	Robl_LC7 domain-containing protein.	0.999
D910_01790	D910_12717	N6TPH2	U4UYQ3	Uncharacterized protein.	Aa_trans domain-containing protein.	0.988
D910_02808	D910_01790	N6SZC3	N6TPH2	Uncharacterized protein.	Uncharacterized protein.	0.987
D910_02808	D910_03350	N6SZC3	N6UH29	Uncharacterized protein.	Uncharacterized protein.	0.998
D910_02808	D910_05810	N6SZC3	J3JZ49	Uncharacterized protein.	Robl_LC7 domain-containing protein.	0.999
D910_02808	D910_12717	N6SZC3	U4UYQ3	Uncharacterized protein.	Aa_trans domain-containing protein.	0.523
D910_03128	D910_09870	U4U090	U4UHP9	Uncharacterized protein.	VPS37 C-terminal domain-containing protein.	0.900
D910_03350	D910_01790	N6UH29	N6TPH2	Uncharacterized protein.	Uncharacterized protein.	0.998
D910_03350	D910_02808	N6UH29	N6SZC3	Uncharacterized protein.	Uncharacterized protein.	0.998
D910_03350	D910_05810	N6UH29	J3JZ49	Uncharacterized protein.	Robl_LC7 domain-containing protein.	0.999
D910_03350	D910_12717	N6UH29	U4UYQ3	Uncharacterized protein.	Aa_trans domain-containing protein.	0.992
D910_03933	D910_06682	N6SRH7	J3JY72	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.766
D910_03933	D910_11022	N6SRH7	U4UU67	Uncharacterized protein.	Reverse transcriptase domain-containing protein.	0.790
D910_03933	D910_11189	N6SRH7	U4UN67	Uncharacterized protein.	Uncharacterized protein.	0.790
D910_05367	D910_06682	U4U287	J3JY72	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.502
D910_05367	D910_10810	U4U287	U4UTK0	Uncharacterized protein.	PKD_channel domain-containing protein.	0.564
D910_05810	D910_01790	J3JZ49	N6TPH2	Robl_LC7 domain-containing protein.	Uncharacterized protein.	0.999
D910_05810	D910_02808	J3JZ49	N6SZC3	Robl_LC7 domain-containing protein.	Uncharacterized protein.	0.999