34 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_00634	Integrin beta. (641 aa)
	D910_00873	Uncharacterized protein. (406 aa)
	D910_06108	LAM_G_DOMAIN domain-containing protein. (224 aa)
	D910_06809	Uncharacterized protein. (1379 aa)
	D910_06799	ANTH domain-containing protein. (189 aa)
	D910_03679	Uncharacterized protein. (107 aa)
	D910_07184	t-SNARE coiled-coil homology domain-containing protein. (287 aa)
	D910_03947	Integrin beta. (640 aa)
	D910_03680	t-SNARE coiled-coil homology domain-containing protein. (64 aa)
	D910_06801	ENTH domain-containing protein. (475 aa)
	D910_00700	Uncharacterized protein. (159 aa)
	D910_03187	Uncharacterized protein. (287 aa)
	D910_06106	Uncharacterized protein. (246 aa)
	D910_06081	Uncharacterized protein. (1335 aa)
	D910_02206	Uncharacterized protein. (1072 aa)
	D910_01590	Uncharacterized protein. (126 aa)
	D910_00835	Uncharacterized protein. (184 aa)
	D910_02872	PX domain-containing protein; Belongs to the tetraspanin (TM4SF) family. (682 aa)
	D910_00834	Uncharacterized protein. (1581 aa)
	D910_00779	Uncharacterized protein. (184 aa)
	D910_12783	ENTH domain-containing protein. (600 aa)
	D910_12581	EGF_2 domain-containing protein. (229 aa)
	D910_12582	Tox-GHH domain-containing protein. (1613 aa)
	D910_10507	Integrin beta. (784 aa)
	D910_00047	Uncharacterized protein. (291 aa)
	D910_12062	Uncharacterized protein. (74 aa)
	D910_09269	Uncharacterized protein. (409 aa)
	D910_12580	Uncharacterized protein. (493 aa)
	D910_10232	LAM_G_DOMAIN domain-containing protein. (456 aa)
	D910_03488	Uncharacterized protein. (543 aa)
	D910_01613	Uncharacterized protein. (128 aa)
	D910_01035	LAM_G_DOMAIN domain-containing protein. (60 aa)
	D910_01591	Uncharacterized protein. (469 aa)
	D910_06107	Uncharacterized protein. (377 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00700	D910_00835	U4U5P3	U4U0U4	Uncharacterized protein.	Uncharacterized protein.	0.675
D910_00779	D910_06106	U4V043	U4U490	Uncharacterized protein.	Uncharacterized protein.	0.909
D910_00779	D910_06107	U4V043	U4UFN0	Uncharacterized protein.	Uncharacterized protein.	0.900
D910_00779	D910_06108	U4V043	U4UDQ5	Uncharacterized protein.	LAM_G_DOMAIN domain-containing protein.	0.868
D910_00779	D910_10232	U4V043	U4UIQ5	Uncharacterized protein.	LAM_G_DOMAIN domain-containing protein.	0.900
D910_00834	D910_03679	U4TZI3	U4U8J6	Uncharacterized protein.	Uncharacterized protein.	0.455
D910_00834	D910_03680	U4TZI3	U4U6N1	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.455
D910_00834	D910_06081	U4TZI3	U4U462	Uncharacterized protein.	Uncharacterized protein.	0.997
D910_00834	D910_07184	U4TZI3	U4U7F9	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.455
D910_00835	D910_00700	U4U0U4	U4U5P3	Uncharacterized protein.	Uncharacterized protein.	0.675
D910_01590	D910_03679	U4U0X7	U4U8J6	Uncharacterized protein.	Uncharacterized protein.	0.455
D910_01590	D910_03680	U4U0X7	U4U6N1	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.455
D910_01590	D910_06081	U4U0X7	U4U462	Uncharacterized protein.	Uncharacterized protein.	0.997
D910_01590	D910_07184	U4U0X7	U4U7F9	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.455
D910_01591	D910_03679	U4TTW9	U4U8J6	Uncharacterized protein.	Uncharacterized protein.	0.455
D910_01591	D910_03680	U4TTW9	U4U6N1	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.455
D910_01591	D910_06081	U4TTW9	U4U462	Uncharacterized protein.	Uncharacterized protein.	0.997
D910_01591	D910_07184	U4TTW9	U4U7F9	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.455
D910_01613	D910_03679	U4TW84	U4U8J6	Uncharacterized protein.	Uncharacterized protein.	0.455
D910_01613	D910_03680	U4TW84	U4U6N1	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.455