63 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_05579	Uncharacterized protein. (1655 aa)
	D910_07671	Uncharacterized protein. (701 aa)
	D910_05061	Phosphatidylinositol 3-kinase catalytic subunit type 3. (885 aa)
	D910_08023	Uncharacterized protein. (1146 aa)
	D910_04373	E3 ubiquitin-protein ligase. (858 aa)
	D910_07256	C2 domain-containing protein. (160 aa)
	D910_04196	Uncharacterized protein. (313 aa)
	D910_00516	Uncharacterized protein. (2294 aa)
	D910_07097	DUF3668 domain-containing protein. (781 aa)
	D910_10364	Uncharacterized protein. (273 aa)
	D910_07904	C2 domain-containing protein. (124 aa)
	D910_10781	Uncharacterized protein. (1379 aa)
	D910_10233	Uncharacterized protein. (779 aa)
	D910_10316	Rho-GAP domain-containing protein. (965 aa)
	D910_08578	Uncharacterized protein. (1190 aa)
	D910_06761	Uncharacterized protein. (295 aa)
	D910_08060	Uncharacterized protein; Belongs to the DOCK family. (2029 aa)
	D910_07876	Uncharacterized protein. (490 aa)
	D910_08568	Uncharacterized protein. (546 aa)
	D910_05991	Phosphoinositide phospholipase C. (1010 aa)
	D910_07591	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades. (1224 aa)
	D910_08309	Uncharacterized protein. (488 aa)
	D910_01135	C2 domain-containing protein. (156 aa)
	D910_07908	C2 domain-containing protein. (164 aa)
	D910_11009	Uncharacterized protein. (544 aa)
	D910_11917	FIP-RBD domain-containing protein. (492 aa)
	D910_00044	Uncharacterized protein. (271 aa)
	D910_09358	Uncharacterized protein. (519 aa)
	D910_09293	Phosphoinositide phospholipase C. (865 aa)
	D910_09407	DHR-1 domain-containing protein; Belongs to the DOCK family. (596 aa)
	D910_12548	Uncharacterized protein. (653 aa)
	D910_00484	C2 domain-containing protein. (222 aa)
	D910_11318	Uncharacterized protein; Belongs to the aldehyde dehydrogenase family. (1714 aa)
	D910_01214	C2 domain-containing protein. (160 aa)
	D910_10002	Uncharacterized protein. (597 aa)
	D910_11968	C2 domain-containing protein. (264 aa)
	D910_02772	Uncharacterized protein. (324 aa)
	D910_06177	Uncharacterized protein. (501 aa)
	D910_04701	C2 domain-containing protein. (358 aa)
	D910_09123	Uncharacterized protein. (395 aa)
	D910_00582	C2 domain-containing protein. (224 aa)
	D910_02159	Uncharacterized protein. (979 aa)
	D910_01136	Uncharacterized protein. (79 aa)
	D910_02162	Uncharacterized protein. (684 aa)
	D910_01613	Uncharacterized protein. (128 aa)
	D910_04185	Uncharacterized protein. (2127 aa)
	D910_03406	Uncharacterized protein. (1261 aa)
	D910_01251	C2 domain-containing protein. (377 aa)
	D910_04202	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1075 aa)
	D910_04478	Uncharacterized protein; Belongs to the DOCK family. (2086 aa)
	D910_02206	Uncharacterized protein. (1072 aa)
	D910_02112	Uncharacterized protein. (2124 aa)
	D910_06081	Uncharacterized protein. (1335 aa)
	D910_04602	C2 domain-containing protein. (65 aa)
	D910_05340	C2 domain-containing protein. (137 aa)
	D910_05392	Uncharacterized protein. (1141 aa)
	D910_06229	Uncharacterized protein. (1135 aa)
	D910_05764	C2 domain-containing protein. (116 aa)
	D910_07453	Uncharacterized protein; Belongs to the DOCK family. (1894 aa)
	D910_03641	Uncharacterized protein. (773 aa)
	D910_06873	Uncharacterized protein. (1573 aa)
	D910_11393	Uncharacterized protein. (915 aa)
	D910_11708	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (2794 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00044	D910_04202	U4UNF5	U4U148	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.905
D910_00044	D910_06177	U4UNF5	N6TXU5	Uncharacterized protein.	Uncharacterized protein.	0.902
D910_00044	D910_07591	U4UNF5	U4UD37	Uncharacterized protein.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.	0.934
D910_00516	D910_04373	U4UA05	U4UAI6	Uncharacterized protein.	E3 ubiquitin-protein ligase.	0.904
D910_00582	D910_11393	U4TS23	U4UV51	C2 domain-containing protein.	Uncharacterized protein.	0.657
D910_01135	D910_05764	U4UCS3	U4U7T4	C2 domain-containing protein.	C2 domain-containing protein.	0.914
D910_01135	D910_06081	U4UCS3	U4U462	C2 domain-containing protein.	Uncharacterized protein.	0.509
D910_01136	D910_06081	U4TVA2	U4U462	Uncharacterized protein.	Uncharacterized protein.	0.509
D910_01214	D910_05764	N6T9P1	U4U7T4	C2 domain-containing protein.	C2 domain-containing protein.	0.930
D910_01214	D910_06081	N6T9P1	U4U462	C2 domain-containing protein.	Uncharacterized protein.	0.509
D910_01251	D910_06081	U4U060	U4U462	C2 domain-containing protein.	Uncharacterized protein.	0.509
D910_01251	D910_07256	U4U060	U4UA45	C2 domain-containing protein.	C2 domain-containing protein.	0.926
D910_01613	D910_06081	U4TW84	U4U462	Uncharacterized protein.	Uncharacterized protein.	0.997
D910_01613	D910_07876	U4TW84	U4UDZ2	Uncharacterized protein.	Uncharacterized protein.	0.749
D910_01613	D910_08309	U4TW84	U4UD35	Uncharacterized protein.	Uncharacterized protein.	0.564
D910_02112	D910_10781	U4U3Y2	U4UK42	Uncharacterized protein.	Uncharacterized protein.	0.752
D910_02206	D910_06081	U4U2F4	U4U462	Uncharacterized protein.	Uncharacterized protein.	0.997
D910_02206	D910_07876	U4U2F4	U4UDZ2	Uncharacterized protein.	Uncharacterized protein.	0.749
D910_02206	D910_08309	U4U2F4	U4UD35	Uncharacterized protein.	Uncharacterized protein.	0.673
D910_02772	D910_06081	N6TGV1	U4U462	Uncharacterized protein.	Uncharacterized protein.	0.509