28 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_00140	Uncharacterized protein. (77 aa)
	D910_11655	MFS domain-containing protein. (346 aa)
	D910_10415	Uncharacterized protein. (1062 aa)
	D910_05533	Methyltranfer_dom domain-containing protein. (204 aa)
	D910_08309	Uncharacterized protein. (488 aa)
	D910_03679	Uncharacterized protein. (107 aa)
	D910_05180	SH3 domain-containing protein. (561 aa)
	D910_01283	Uncharacterized protein. (129 aa)
	D910_05738	Synapsin_C domain-containing protein. (282 aa)
	D910_03680	t-SNARE coiled-coil homology domain-containing protein. (64 aa)
	D910_06081	Uncharacterized protein. (1335 aa)
	D910_05156	Uncharacterized protein; Belongs to the GST superfamily. (434 aa)
	D910_02206	Uncharacterized protein. (1072 aa)
	D910_03542	PID domain-containing protein. (764 aa)
	D910_10416	Uncharacterized protein. (86 aa)
	D910_05179	Uncharacterized protein. (489 aa)
	D910_00834	Uncharacterized protein. (1581 aa)
	D910_03543	Uncharacterized protein. (355 aa)
	D910_01613	Uncharacterized protein. (128 aa)
	D910_02521	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (135 aa)
	D910_01591	Uncharacterized protein. (469 aa)
	D910_01190	Protein kinase domain-containing protein. (406 aa)
	D910_01563	Uncharacterized protein. (457 aa)
	D910_07184	t-SNARE coiled-coil homology domain-containing protein. (287 aa)
	D910_01590	Uncharacterized protein. (126 aa)
	D910_05740	Uncharacterized protein. (269 aa)
	D910_07019	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (1026 aa)
	D910_00262	V-SNARE coiled-coil homology domain-containing protein. (95 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00140	D910_00262	U4UZ75	N6T9N7	Uncharacterized protein.	V-SNARE coiled-coil homology domain-containing protein.	0.701
D910_00140	D910_00834	U4UZ75	U4TZI3	Uncharacterized protein.	Uncharacterized protein.	0.452
D910_00140	D910_01190	U4UZ75	U4TR23	Uncharacterized protein.	Protein kinase domain-containing protein.	0.927
D910_00140	D910_01283	U4UZ75	U4UB36	Uncharacterized protein.	Uncharacterized protein.	0.933
D910_00140	D910_01563	U4UZ75	N6UTD1	Uncharacterized protein.	Uncharacterized protein.	0.927
D910_00140	D910_01590	U4UZ75	U4U0X7	Uncharacterized protein.	Uncharacterized protein.	0.436
D910_00140	D910_01591	U4UZ75	U4TTW9	Uncharacterized protein.	Uncharacterized protein.	0.436
D910_00140	D910_01613	U4UZ75	U4TW84	Uncharacterized protein.	Uncharacterized protein.	0.436
D910_00140	D910_02206	U4UZ75	U4U2F4	Uncharacterized protein.	Uncharacterized protein.	0.497
D910_00140	D910_02521	U4UZ75	U4TU66	Uncharacterized protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.637
D910_00140	D910_03679	U4UZ75	U4U8J6	Uncharacterized protein.	Uncharacterized protein.	0.412
D910_00140	D910_03680	U4UZ75	U4U6N1	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.412
D910_00140	D910_05179	U4UZ75	U4UCW2	Uncharacterized protein.	Uncharacterized protein.	0.488
D910_00140	D910_05180	U4UZ75	U4UB12	Uncharacterized protein.	SH3 domain-containing protein.	0.488
D910_00140	D910_05738	U4UZ75	U4UCQ6	Uncharacterized protein.	Synapsin_C domain-containing protein.	0.534
D910_00140	D910_05740	U4UZ75	U4U7R1	Uncharacterized protein.	Uncharacterized protein.	0.534
D910_00140	D910_06081	U4UZ75	U4U462	Uncharacterized protein.	Uncharacterized protein.	0.989
D910_00140	D910_07019	U4UZ75	N6U5E3	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.638
D910_00140	D910_07184	U4UZ75	U4U7F9	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.412
D910_00140	D910_08309	U4UZ75	U4UD35	Uncharacterized protein.	Uncharacterized protein.	0.797