46 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_04042	AP-1 complex subunit gamma. (996 aa)
	D910_06084	Arrestin_C domain-containing protein. (379 aa)
	D910_09793	Clat_adaptor_s domain-containing protein. (191 aa)
	D910_01975	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (157 aa)
	D910_11055	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (422 aa)
	D910_01923	DUF1681 domain-containing protein. (243 aa)
	D910_06682	Uncharacterized protein; Belongs to the synaptobrevin family. (220 aa)
	D910_09617	PX domain-containing protein. (485 aa)
	D910_08046	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (180 aa)
	D910_00262	V-SNARE coiled-coil homology domain-containing protein. (95 aa)
	D910_12142	AP3B1_C domain-containing protein. (1043 aa)
	D910_05332	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (184 aa)
	D910_08690	Arrestin_C domain-containing protein. (430 aa)
	D910_08353	Uncharacterized protein. (555 aa)
	D910_05092	SH3 domain-containing protein. (557 aa)
	D910_06403	Rho-GAP domain-containing protein. (688 aa)
	D910_01740	PUM-HD domain-containing protein. (495 aa)
	D910_02903	C-type lectin domain-containing protein. (210 aa)
	D910_01463	PUM-HD domain-containing protein. (501 aa)
	D910_02872	PX domain-containing protein; Belongs to the tetraspanin (TM4SF) family. (682 aa)
	D910_02937	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (227 aa)
	D910_01594	Uncharacterized protein. (840 aa)
	D910_05218	Uncharacterized protein. (201 aa)
	D910_01593	Uncharacterized protein. (202 aa)
	D910_05691	PX domain-containing protein. (558 aa)
	D910_02449	IMD domain-containing protein. (872 aa)
	D910_06801	ENTH domain-containing protein. (475 aa)
	D910_06229	Uncharacterized protein. (1135 aa)
	D910_06799	ANTH domain-containing protein. (189 aa)
	D910_07941	I/LWEQ domain-containing protein. (913 aa)
	D910_08150	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (193 aa)
	D910_08574	Protein YIPF. (222 aa)
	D910_07008	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (1328 aa)
	D910_05041	Arrestin_C domain-containing protein. (355 aa)
	D910_05219	Uncharacterized protein. (769 aa)
	D910_08626	Uncharacterized protein. (357 aa)
	D910_07638	Uncharacterized protein. (706 aa)
	D910_12066	Arrestin_C domain-containing protein. (252 aa)
	D910_12347	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1715 aa)
	D910_09505	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (786 aa)
	D910_09557	PUM-HD domain-containing protein. (258 aa)
	D910_12027	Uncharacterized protein. (427 aa)
	D910_00554	Uncharacterized protein. (235 aa)
	D910_11708	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (2794 aa)
	D910_11753	Uncharacterized protein. (455 aa)
	D910_12783	ENTH domain-containing protein. (600 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00262	D910_01923	N6T9N7	J3JWK0	V-SNARE coiled-coil homology domain-containing protein.	DUF1681 domain-containing protein.	0.715
D910_00262	D910_01975	N6T9N7	J3JU90	V-SNARE coiled-coil homology domain-containing protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.639
D910_00262	D910_02937	N6T9N7	U4TZQ8	V-SNARE coiled-coil homology domain-containing protein.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.784
D910_00262	D910_04042	N6T9N7	U4U9M5	V-SNARE coiled-coil homology domain-containing protein.	AP-1 complex subunit gamma.	0.755
D910_00262	D910_05332	N6T9N7	N6TKI6	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.437
D910_00262	D910_06229	N6T9N7	U4U733	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.935
D910_00262	D910_06403	N6T9N7	N6USC1	V-SNARE coiled-coil homology domain-containing protein.	Rho-GAP domain-containing protein.	0.637
D910_00262	D910_06682	N6T9N7	J3JY72	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.746
D910_00262	D910_06799	N6T9N7	U4U8R8	V-SNARE coiled-coil homology domain-containing protein.	ANTH domain-containing protein.	0.667
D910_00262	D910_06801	N6T9N7	U4U6D0	V-SNARE coiled-coil homology domain-containing protein.	ENTH domain-containing protein.	0.667
D910_00262	D910_07008	N6T9N7	U4UBD3	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.548
D910_00262	D910_07638	N6T9N7	U4UI51	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.719
D910_00262	D910_07941	N6T9N7	U4U9J9	V-SNARE coiled-coil homology domain-containing protein.	I/LWEQ domain-containing protein.	0.757
D910_00262	D910_08046	N6T9N7	N6T7B4	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.437
D910_00262	D910_08150	N6T9N7	U4UA39	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.437
D910_00262	D910_08626	N6T9N7	U4UFZ8	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.607
D910_00262	D910_09505	N6T9N7	U4UQ80	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.548
D910_00262	D910_09617	N6T9N7	N6T3D5	V-SNARE coiled-coil homology domain-containing protein.	PX domain-containing protein.	0.733
D910_00262	D910_09793	N6T9N7	J3JTK8	V-SNARE coiled-coil homology domain-containing protein.	Clat_adaptor_s domain-containing protein.	0.709
D910_00262	D910_11055	N6T9N7	J3JW23	V-SNARE coiled-coil homology domain-containing protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.660