23 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_08136	LIM zinc-binding domain-containing protein. (354 aa)
	D910_08092	Uncharacterized protein. (244 aa)
	D910_08162	Roc domain-containing protein. (384 aa)
	D910_10608	Cbl-PTB domain-containing protein. (181 aa)
	D910_08134	LIM zinc-binding domain-containing protein. (112 aa)
	D910_08163	Uncharacterized protein. (260 aa)
	D910_07370	Uncharacterized protein. (478 aa)
	D910_08135	Uncharacterized protein. (98 aa)
	D910_07453	Uncharacterized protein; Belongs to the DOCK family. (1894 aa)
	D910_05674	KxDL domain-containing protein. (164 aa)
	D910_02660	Uncharacterized protein. (214 aa)
	D910_00842	ELMO domain-containing protein. (319 aa)
	D910_04444	Uncharacterized protein. (193 aa)
	D910_06888	Uncharacterized protein. (970 aa)
	D910_00798	Uncharacterized protein. (207 aa)
	D910_08161	Protein kinase domain-containing protein. (684 aa)
	D910_02333	Uncharacterized protein. (201 aa)
	D910_11393	Uncharacterized protein. (915 aa)
	D910_00083	Uncharacterized protein. (239 aa)
	D910_00091	Uncharacterized protein. (311 aa)
	D910_11573	Uncharacterized protein. (530 aa)
	D910_08164	ANK_REP_REGION domain-containing protein. (591 aa)
	D910_12501	Uncharacterized protein. (1644 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00083	D910_02660	U4UT05	U4TUK4	Uncharacterized protein.	Uncharacterized protein.	0.925
D910_00083	D910_08161	U4UT05	U4ULB5	Uncharacterized protein.	Protein kinase domain-containing protein.	0.676
D910_00083	D910_08162	U4UT05	U4UKX0	Uncharacterized protein.	Roc domain-containing protein.	0.676
D910_00083	D910_08163	U4UT05	U4UCN6	Uncharacterized protein.	Uncharacterized protein.	0.676
D910_00083	D910_08164	U4UT05	N6T055	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.676
D910_00083	D910_10608	U4UT05	U4UH44	Uncharacterized protein.	Cbl-PTB domain-containing protein.	0.929
D910_00091	D910_00798	U4UNK1	J3JXY9	Uncharacterized protein.	Uncharacterized protein.	0.528
D910_00091	D910_02660	U4UNK1	U4TUK4	Uncharacterized protein.	Uncharacterized protein.	0.811
D910_00091	D910_07453	U4UNK1	U4U860	Uncharacterized protein.	Uncharacterized protein; Belongs to the DOCK family.	0.835
D910_00091	D910_08092	U4UNK1	U4UL50	Uncharacterized protein.	Uncharacterized protein.	0.929
D910_00798	D910_00091	J3JXY9	U4UNK1	Uncharacterized protein.	Uncharacterized protein.	0.528
D910_00798	D910_02333	J3JXY9	J3JYW1	Uncharacterized protein.	Uncharacterized protein.	0.433
D910_00798	D910_02660	J3JXY9	U4TUK4	Uncharacterized protein.	Uncharacterized protein.	0.620
D910_00798	D910_04444	J3JXY9	N6UAU8	Uncharacterized protein.	Uncharacterized protein.	0.430
D910_00798	D910_07453	J3JXY9	U4U860	Uncharacterized protein.	Uncharacterized protein; Belongs to the DOCK family.	0.553
D910_00798	D910_08092	J3JXY9	U4UL50	Uncharacterized protein.	Uncharacterized protein.	0.528
D910_00798	D910_08134	J3JXY9	U4UEM2	Uncharacterized protein.	LIM zinc-binding domain-containing protein.	0.574
D910_00798	D910_08135	J3JXY9	U4UA21	Uncharacterized protein.	Uncharacterized protein.	0.574
D910_00798	D910_08136	J3JXY9	U4UL92	Uncharacterized protein.	LIM zinc-binding domain-containing protein.	0.574
D910_00798	D910_08161	J3JXY9	U4ULB5	Uncharacterized protein.	Protein kinase domain-containing protein.	0.891