110 items (Dendroctonus ponderosae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D910_05223	Uncharacterized protein. (354 aa)
	D910_04582	Uncharacterized protein. (626 aa)
	D910_02270	Uncharacterized protein. (204 aa)
	D910_04797	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1708 aa)
	D910_02474	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (590 aa)
	D910_05260	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (476 aa)
	D910_06578	Polypeptide N-acetylgalactosaminyltransferase. (759 aa)
	D910_06735	Uncharacterized protein; Belongs to the actin family. (335 aa)
	D910_02899	Uncharacterized protein. (85 aa)
	D910_03039	VPS9 domain-containing protein. (319 aa)
	D910_07175	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (826 aa)
	D910_06420	Uncharacterized protein. (1497 aa)
	D910_06630	Uncharacterized protein. (1275 aa)
	D910_06110	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1158 aa)
	D910_07655	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (698 aa)
	D910_08150	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (193 aa)
	D910_07408	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (843 aa)
	D910_05304	Uncharacterized protein. (634 aa)
	D910_04720	Uncharacterized protein; Belongs to the tubulin family. (835 aa)
	D910_08721	WD_REPEATS_REGION domain-containing protein. (184 aa)
	D910_04887	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (257 aa)
	D910_07457	Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (374 aa)
	D910_06238	CAP-Gly domain-containing protein. (1221 aa)
	D910_07980	Uncharacterized protein. (718 aa)
	D910_09611	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (458 aa)
	D910_08852	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (229 aa)
	D910_09942	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (978 aa)
	D910_06472	Uncharacterized protein. (147 aa)
	D910_09604	Uncharacterized protein. (4680 aa)
	D910_09064	Polypeptide N-acetylgalactosaminyltransferase. (525 aa)
	D910_09850	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (860 aa)
	D910_09935	Uncharacterized protein. (756 aa)
	D910_11200	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (697 aa)
	D910_07299	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (470 aa)
	D910_10578	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (860 aa)
	D910_07760	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (73 aa)
	D910_11826	Uncharacterized protein. (361 aa)
	D910_08102	Uncharacterized protein. (817 aa)
	D910_11267	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (957 aa)
	D910_09971	Uncharacterized protein. (178 aa)
	D910_05332	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (184 aa)
	D910_10804	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (447 aa)
	D910_07498	Uncharacterized protein. (458 aa)
	D910_05685	Uncharacterized protein; Belongs to the synaptobrevin family. (246 aa)
	D910_02719	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (626 aa)
	D910_12797	Uncharacterized protein. (291 aa)
	D910_06922	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
	D910_08819	Uncharacterized protein. (815 aa)
	D910_11371	Uncharacterized protein; Belongs to the actin family. (376 aa)
	D910_09416	Uncharacterized protein. (223 aa)
	D910_03342	Guanine nucleotide-binding protein subunit gamma. (330 aa)
	D910_06618	t-SNARE coiled-coil homology domain-containing protein. (306 aa)
	D910_09109	PlsC domain-containing protein. (390 aa)
	D910_05046	Uncharacterized protein. (308 aa)
	D910_01313	Uncharacterized protein. (1307 aa)
	D910_02407	Uncharacterized protein. (248 aa)
	D910_00495	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (402 aa)
	D910_02119	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (598 aa)
	D910_03008	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (459 aa)
	D910_02246	WD_REPEATS_REGION domain-containing protein. (648 aa)
	D910_03309	Uncharacterized protein. (193 aa)
	D910_03319	GOLD domain-containing protein. (189 aa)
	D910_03635	Uncharacterized protein; Belongs to the tubulin family. (299 aa)
	D910_03913	Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (302 aa)
	D910_03192	Uncharacterized protein. (499 aa)
	D910_02560	Uncharacterized protein. (492 aa)
	D910_03575	FAM193_C domain-containing protein. (1039 aa)
	D910_07340	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (276 aa)
	D910_07680	Uncharacterized protein. (186 aa)
	D910_05483	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (288 aa)
	D910_07770	GOLD domain-containing protein. (204 aa)
	D910_05236	SGNH_hydro domain-containing protein. (223 aa)
	D910_05319	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (508 aa)
	D910_12757	Uncharacterized protein. (215 aa)
	D910_12624	Uncharacterized protein. (397 aa)
	D910_08046	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (180 aa)
	D910_07106	Uncharacterized protein. (159 aa)
	D910_11400	Uncharacterized protein. (270 aa)
	D910_09097	WD_REPEATS_REGION domain-containing protein. (1158 aa)
	D910_12029	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1018 aa)
	D910_10896	Uncharacterized protein. (470 aa)
	D910_04889	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (173 aa)
	D910_00139	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (149 aa)
	D910_12752	Tubulin_C domain-containing protein. (271 aa)
	D910_12605	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (589 aa)
	D910_11281	Arf-GAP domain-containing protein. (506 aa)
	D910_11082	Uncharacterized protein. (328 aa)
	D910_00633	Tubulin domain-containing protein; Belongs to the tubulin family. (124 aa)
	D910_10894	Uncharacterized protein. (506 aa)
	D910_10577	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (231 aa)
	D910_10458	Uncharacterized protein. (85 aa)
	D910_12652	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (410 aa)
	D910_10318	ER lumen protein-retaining receptor. (212 aa)
	D910_12205	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (772 aa)
	D910_09849	Uncharacterized protein. (203 aa)
	D910_12651	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (152 aa)
	D910_12067	Uncharacterized protein. (168 aa)
	D910_12292	Dynein light chain. (125 aa)
	D910_09289	Uncharacterized protein. (543 aa)
	D910_09171	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (905 aa)
	D910_11465	SEC7 domain-containing protein. (1699 aa)
	D910_11405	SGNH_hydro domain-containing protein. (245 aa)
	D910_00067	Uncharacterized protein. (60 aa)
	D910_12791	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (647 aa)
	D910_08722	LisH domain-containing protein. (110 aa)
	D910_08647	Uncharacterized protein. (150 aa)
	D910_10636	Uncharacterized protein. (381 aa)
	D910_01608	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (391 aa)
	D910_03532	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1897 aa)
	D910_05188	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (796 aa)

Your Current Organism:

Dendroctonus ponderosae

NCBI taxonomy Id: 77166
Other names: D. ponderosae, mountain pine beetle

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D910_00067	D910_00139	U4UNI1	U4UZC2	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.470
D910_00067	D910_00495	U4UNI1	U4TU80	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.534
D910_00067	D910_00633	U4UNI1	U4UTU5	Uncharacterized protein.	Tubulin domain-containing protein; Belongs to the tubulin family.	0.800
D910_00067	D910_01608	U4UNI1	U4U0X1	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.814
D910_00067	D910_03008	U4UNI1	U4TVH8	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.534
D910_00067	D910_03635	U4UNI1	U4TX88	Uncharacterized protein.	Uncharacterized protein; Belongs to the tubulin family.	0.813
D910_00067	D910_04720	U4UNI1	U4UBK4	Uncharacterized protein.	Uncharacterized protein; Belongs to the tubulin family.	0.751
D910_00067	D910_04887	U4UNI1	U4UC19	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.492
D910_00067	D910_09611	U4UNI1	U4UE89	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.812
D910_00067	D910_09849	U4UNI1	U4UQV2	Uncharacterized protein.	Uncharacterized protein.	0.502
D910_00067	D910_09850	U4UNI1	U4UHM8	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.502
D910_00067	D910_10804	U4UNI1	N6TVN4	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.818
D910_00067	D910_12651	U4UNI1	U4UQL3	Uncharacterized protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.463
D910_00139	D910_00067	U4UZC2	U4UNI1	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Uncharacterized protein.	0.470
D910_00139	D910_00495	U4UZC2	U4TU80	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.648
D910_00139	D910_00633	U4UZC2	U4UTU5	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Tubulin domain-containing protein; Belongs to the tubulin family.	0.841
D910_00139	D910_01608	U4UZC2	U4U0X1	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.709
D910_00139	D910_02899	U4UZC2	U4U695	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Uncharacterized protein.	0.791
D910_00139	D910_03008	U4UZC2	U4TVH8	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.633
D910_00139	D910_03635	U4UZC2	U4TX88	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Uncharacterized protein; Belongs to the tubulin family.	0.715