STRINGSTRING
SMAC_00364 SMAC_00364 SMAC_01211 SMAC_01211 SMAC_01370 SMAC_01370 SMAC_01394 SMAC_01394 SMAC_01721 SMAC_01721 SMAC_01899 SMAC_01899 SMAC_04972 SMAC_04972 SMAC_02583 SMAC_02583 SMAC_04098 SMAC_04098 SMAC_08900 SMAC_08900
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_00364WGS project CABT00000000 data, contig 2.1. (414 aa)
SMAC_01211WGS project CABT00000000 data, contig 2.4. (445 aa)
SMAC_01370WGS project CABT00000000 data, contig 2.4; Belongs to the heat shock protein 70 family. (571 aa)
SMAC_01394WGS project CABT00000000 data, contig 2.4. (576 aa)
SMAC_01721WGS project CABT00000000 data, contig 2.5. (707 aa)
SMAC_01899WGS project CABT00000000 data, contig 2.5. (427 aa)
SMAC_04972WGS project CABT00000000 data, contig 2.8; Belongs to the heat shock protein 70 family. (632 aa)
SMAC_02583WGS project CABT00000000 data, contig 2.11. (340 aa)
SMAC_04098WGS project CABT00000000 data, contig 2.15. (361 aa)
SMAC_08900WGS project CABT00000000 data, contig 2.69; Belongs to the heat shock protein 70 family. (624 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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