STRINGSTRING
SMAC_00245 SMAC_00245 SMAC_05738 SMAC_05738 SMAC_08314 SMAC_08314 SMAC_05549 SMAC_05549 SMAC_06157 SMAC_06157 SMAC_08187 SMAC_08187
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_00245WGS project CABT00000000 data, contig 2.1. (483 aa)
SMAC_05738WGS project CABT00000000 data, contig 2.6. (830 aa)
SMAC_08314WGS project CABT00000000 data, contig 2.9. (518 aa)
SMAC_05549WGS project CABT00000000 data, contig 2.26. (425 aa)
SMAC_06157WGS project CABT00000000 data, contig 2.33; Belongs to the heat shock protein 70 family. (645 aa)
SMAC_08187WGS project CABT00000000 data, contig 2.53. (1004 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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