STRINGSTRING
SMAC_00372 SMAC_00372 SMAC_00671 SMAC_00671 SMAC_00891 SMAC_00891 SMAC_02474 SMAC_02474 SMAC_01856 SMAC_01856 SMAC_01857 SMAC_01857 SMAC_01906 SMAC_01906 SMAC_04499 SMAC_04499 SMAC_04447 SMAC_04447 SMAC_04445 SMAC_04445 SMAC_06278 SMAC_06278
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_00372WGS project CABT00000000 data, contig 2.1. (635 aa)
SMAC_00671WGS project CABT00000000 data, contig 2.2. (327 aa)
SMAC_00891WGS project CABT00000000 data, contig 2.2. (988 aa)
SMAC_02474WGS project CABT00000000 data, contig 2.3. (221 aa)
SMAC_01856WGS project CABT00000000 data, contig 2.5. (483 aa)
SMAC_01857WGS project CABT00000000 data, contig 2.5. (234 aa)
SMAC_01906WGS project CABT00000000 data, contig 2.5. (489 aa)
SMAC_04499Serine/threonine-protein phosphatase. (460 aa)
SMAC_04447WGS project CABT00000000 data, contig 2.14. (221 aa)
SMAC_04445WGS project CABT00000000 data, contig 2.14. (699 aa)
SMAC_06278WGS project CABT00000000 data, contig 2.34. (358 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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