STRINGSTRING
SMAC_05788 SMAC_05788 SMAC_02111 SMAC_02111 SMAC_04342 SMAC_04342 SMAC_06522 SMAC_06522 SMAC_05691 SMAC_05691 SMAC_07649 SMAC_07649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_05788WGS project CABT00000000 data, contig 2.6. (985 aa)
SMAC_02111WGS project CABT00000000 data, contig 2.18. (2374 aa)
SMAC_04342WGS project CABT00000000 data, contig 2.19. (2209 aa)
SMAC_06522WGS project CABT00000000 data, contig 2.28. (969 aa)
SMAC_05691Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
SMAC_07649WGS project CABT00000000 data, contig 2.31. (355 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.