STRINGSTRING
SMAC_01640 SMAC_01640 SMAC_06671 SMAC_06671 SMAC_06897 SMAC_06897 SMAC_07118 SMAC_07118 SMAC_07211 SMAC_07211
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_01640WGS project CABT00000000 data, contig 2.4. (431 aa)
SMAC_06671Putative ropy-2, dynactin arp1 p62 subunit RO-2. (706 aa)
SMAC_06897Putative dynactin subunit 5 protein. (198 aa)
SMAC_07118WGS project CABT00000000 data, contig 2.39. (218 aa)
SMAC_07211WGS project CABT00000000 data, contig 2.42. (1366 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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