STRINGSTRING
SMAC_00244 SMAC_00244 SMAC_00405 SMAC_00405 SMAC_00793 SMAC_00793 SMAC_02473 SMAC_02473 SMAC_06724 SMAC_06724 SMAC_01495 SMAC_01495 SMAC_01828 SMAC_01828 SMAC_01835 SMAC_01835 SMAC_01872 SMAC_01872 SMAC_06857 SMAC_06857 SMAC_05439 SMAC_05439 SMAC_03222 SMAC_03222 SMAC_03011 SMAC_03011 SMAC_03005 SMAC_03005 SMAC_04962 SMAC_04962 SMAC_04994 SMAC_04994 SMAC_03471 SMAC_03471 SMAC_06666 SMAC_06666 SMAC_06499 SMAC_06499 SMAC_06474 SMAC_06474 SMAC_04079 SMAC_04079 SMAC_03977 SMAC_03977 SMAC_02119 SMAC_02119 SMAC_04280 SMAC_04280 SMAC_04594 SMAC_04594 SMAC_04722 SMAC_04722 SMAC_08991 SMAC_08991 SMAC_06088 SMAC_06088 SMAC_06188 SMAC_06188 SMAC_06189 SMAC_06189 SMAC_06323 SMAC_06323 SMAC_07161 SMAC_07161 SMAC_07467 SMAC_07467 SMAC_07470 SMAC_07470 SMAC_07501 SMAC_07501 SMAC_08106 SMAC_08106
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_00244WGS project CABT00000000 data, contig 2.1. (643 aa)
SMAC_00405WGS project CABT00000000 data, contig 2.1. (1038 aa)
SMAC_00793WGS project CABT00000000 data, contig 2.2. (622 aa)
SMAC_02473WGS project CABT00000000 data, contig 2.3. (235 aa)
SMAC_06724WGS project CABT00000000 data, contig 2.3. (217 aa)
SMAC_01495WGS project CABT00000000 data, contig 2.4. (404 aa)
SMAC_01828WGS project CABT00000000 data, contig 2.5. (299 aa)
SMAC_01835WGS project CABT00000000 data, contig 2.5. (975 aa)
SMAC_01872WGS project CABT00000000 data, contig 2.5. (227 aa)
SMAC_06857WGS project CABT00000000 data, contig 2.6. (214 aa)
SMAC_05439WGS project CABT00000000 data, contig 2.6. (650 aa)
SMAC_03222WGS project CABT00000000 data, contig 2.7; Belongs to the peptidase C2 family. (1279 aa)
SMAC_03011WGS project CABT00000000 data, contig 2.7. (263 aa)
SMAC_03005WGS project CABT00000000 data, contig 2.7. (205 aa)
SMAC_04962Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (237 aa)
SMAC_04994WGS project CABT00000000 data, contig 2.8. (486 aa)
SMAC_03471WGS project CABT00000000 data, contig 2.10. (721 aa)
SMAC_06666WGS project CABT00000000 data, contig 2.13; Belongs to the peptidase C2 family. (1024 aa)
SMAC_06499WGS project CABT00000000 data, contig 2.13; Belongs to the peptidase C2 family. (920 aa)
SMAC_06474WGS project CABT00000000 data, contig 2.13. (499 aa)
SMAC_04079WGS project CABT00000000 data, contig 2.15; Belongs to the peptidase C2 family. (864 aa)
SMAC_03977WGS project CABT00000000 data, contig 2.17. (226 aa)
SMAC_02119Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (274 aa)
SMAC_04280WGS project CABT00000000 data, contig 2.19. (313 aa)
SMAC_04594WGS project CABT00000000 data, contig 2.20. (490 aa)
SMAC_04722WGS project CABT00000000 data, contig 2.21. (641 aa)
SMAC_08991WGS project CABT00000000 data, contig 2.31. (581 aa)
SMAC_06088WGS project CABT00000000 data, contig 2.32. (221 aa)
SMAC_06188WGS project CABT00000000 data, contig 2.33. (1105 aa)
SMAC_06189Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. (722 aa)
SMAC_06323WGS project CABT00000000 data, contig 2.34. (234 aa)
SMAC_07161WGS project CABT00000000 data, contig 2.40. (487 aa)
SMAC_07467WGS project CABT00000000 data, contig 2.46. (545 aa)
SMAC_07470WGS project CABT00000000 data, contig 2.46; Belongs to the AAA ATPase family. (382 aa)
SMAC_07501WGS project CABT00000000 data, contig 2.46. (869 aa)
SMAC_08106WGS project CABT00000000 data, contig 2.52. (558 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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