STRINGSTRING
SMAC_00842 SMAC_00842 SMAC_02497 SMAC_02497 SMAC_05982 SMAC_05982 SMAC_04493 SMAC_04493 SMAC_04084 SMAC_04084 SMAC_02049 SMAC_02049 SMAC_02127 SMAC_02127 SMAC_04772 SMAC_04772 SMAC_08732 SMAC_08732 SMAC_08917 SMAC_08917
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_00842WGS project CABT00000000 data, contig 2.2. (499 aa)
SMAC_02497WGS project CABT00000000 data, contig 2.3. (354 aa)
SMAC_05982WGS project CABT00000000 data, contig 2.6. (238 aa)
SMAC_044935-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. (141 aa)
SMAC_04084WGS project CABT00000000 data, contig 2.15. (1373 aa)
SMAC_02049WGS project CABT00000000 data, contig 2.18. (218 aa)
SMAC_02127Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family. (308 aa)
SMAC_04772WGS project CABT00000000 data, contig 2.21. (417 aa)
SMAC_08732WGS project CABT00000000 data, contig 2.64. (559 aa)
SMAC_08917Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family. (455 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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