STRINGSTRING
SMAC_12736 SMAC_12736 SMAC_01395 SMAC_01395 SMAC_01396 SMAC_01396 SMAC_01852 SMAC_01852 SMAC_05421 SMAC_05421 SMAC_03106 SMAC_03106 SMAC_04952 SMAC_04952 SMAC_05211 SMAC_05211 SMAC_04083 SMAC_04083 SMAC_12591 SMAC_12591 SMAC_07270 SMAC_07270 SMAC_08050 SMAC_08050 SMAC_08527 SMAC_08527 SMAC_09574 SMAC_09574
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_12736WGS project CABT00000000 data, contig 2.2. (146 aa)
SMAC_01395WGS project CABT00000000 data, contig 2.4. (155 aa)
SMAC_01396WGS project CABT00000000 data, contig 2.4; Belongs to the aldehyde dehydrogenase family. (334 aa)
SMAC_01852WGS project CABT00000000 data, contig 2.5. (291 aa)
SMAC_05421WGS project CABT00000000 data, contig 2.6. (495 aa)
SMAC_03106WGS project CABT00000000 data, contig 2.7. (297 aa)
SMAC_04952WGS project CABT00000000 data, contig 2.8. (476 aa)
SMAC_05211Putative MSC7 protein; Belongs to the aldehyde dehydrogenase family. (606 aa)
SMAC_04083WGS project CABT00000000 data, contig 2.15. (486 aa)
SMAC_12591WGS project CABT00000000 data, contig 2.18; Belongs to the aldehyde dehydrogenase family. (375 aa)
SMAC_07270WGS project CABT00000000 data, contig 2.44; Belongs to the aldehyde dehydrogenase family. (484 aa)
SMAC_08050WGS project CABT00000000 data, contig 2.50. (293 aa)
SMAC_08527WGS project CABT00000000 data, contig 2.54; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (732 aa)
SMAC_09574WGS project CABT00000000 data, contig 2.125. (301 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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