14 items (Sordaria macrospora) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SMAC_04331	WGS project CABT00000000 data, contig 2.19. (1147 aa)
	SMAC_04653	WGS project CABT00000000 data, contig 2.21. (753 aa)
	SMAC_04788	WGS project CABT00000000 data, contig 2.21. (453 aa)
	SMAC_05569	Dihydroorotate dehydrogenase (fumarate); Catalyzes the conversion of dihydroorotate to orotate with fumarate as the electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily. (371 aa)
	SMAC_07224	WGS project CABT00000000 data, contig 2.42. (652 aa)
	SMAC_07357	WGS project CABT00000000 data, contig 2.45. (522 aa)
	SMAC_07753	WGS project CABT00000000 data, contig 2.47; Belongs to the adenylate kinase family. (561 aa)
	URA3	Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. (396 aa)
	SMAC_05071	WGS project CABT00000000 data, contig 2.22. (409 aa)
	SMAC_05564	WGS project CABT00000000 data, contig 2.26. (357 aa)
	SMAC_05075	WGS project CABT00000000 data, contig 2.22. (341 aa)
	SMAC_00632	Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily. (298 aa)
	SMAC_00930	WGS project CABT00000000 data, contig 2.2. (1832 aa)
	SMAC_01699	WGS project CABT00000000 data, contig 2.5. (233 aa)

Your Current Organism:

Sordaria macrospora

NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SMAC_00632	SMAC_01699	F7VLN9	F7VRL4	Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	WGS project CABT00000000 data, contig 2.5.	0.426
SMAC_00632	URA3	F7VLN9	P78748	Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family.	0.930
SMAC_00930	SMAC_01699	F7VNH6	F7VRL4	WGS project CABT00000000 data, contig 2.2.	WGS project CABT00000000 data, contig 2.5.	0.694
SMAC_00930	SMAC_04331	F7VNH6	F7W1I9	WGS project CABT00000000 data, contig 2.2.	WGS project CABT00000000 data, contig 2.19.	0.912
SMAC_00930	SMAC_04653	F7VNH6	F7W221	WGS project CABT00000000 data, contig 2.2.	WGS project CABT00000000 data, contig 2.21.	0.863
SMAC_00930	SMAC_04788	F7VNH6	F7W2F6	WGS project CABT00000000 data, contig 2.2.	WGS project CABT00000000 data, contig 2.21.	0.956
SMAC_00930	SMAC_05564	F7VNH6	F7W433	WGS project CABT00000000 data, contig 2.2.	WGS project CABT00000000 data, contig 2.26.	0.985
SMAC_00930	SMAC_05569	F7VNH6	F7W438	WGS project CABT00000000 data, contig 2.2.	Dihydroorotate dehydrogenase (fumarate); Catalyzes the conversion of dihydroorotate to orotate with fumarate as the electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily.	0.850
SMAC_00930	SMAC_07224	F7VNH6	F7W813	WGS project CABT00000000 data, contig 2.2.	WGS project CABT00000000 data, contig 2.42.	0.659
SMAC_00930	URA3	F7VNH6	P78748	WGS project CABT00000000 data, contig 2.2.	Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family.	0.714
SMAC_01699	SMAC_00632	F7VRL4	F7VLN9	WGS project CABT00000000 data, contig 2.5.	Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	0.426
SMAC_01699	SMAC_00930	F7VRL4	F7VNH6	WGS project CABT00000000 data, contig 2.5.	WGS project CABT00000000 data, contig 2.2.	0.694
SMAC_01699	SMAC_04331	F7VRL4	F7W1I9	WGS project CABT00000000 data, contig 2.5.	WGS project CABT00000000 data, contig 2.19.	0.613
SMAC_01699	SMAC_04653	F7VRL4	F7W221	WGS project CABT00000000 data, contig 2.5.	WGS project CABT00000000 data, contig 2.21.	0.987
SMAC_01699	SMAC_04788	F7VRL4	F7W2F6	WGS project CABT00000000 data, contig 2.5.	WGS project CABT00000000 data, contig 2.21.	0.609
SMAC_01699	SMAC_05564	F7VRL4	F7W433	WGS project CABT00000000 data, contig 2.5.	WGS project CABT00000000 data, contig 2.26.	0.707
SMAC_01699	SMAC_05569	F7VRL4	F7W438	WGS project CABT00000000 data, contig 2.5.	Dihydroorotate dehydrogenase (fumarate); Catalyzes the conversion of dihydroorotate to orotate with fumarate as the electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily.	0.981
SMAC_01699	SMAC_07224	F7VRL4	F7W813	WGS project CABT00000000 data, contig 2.5.	WGS project CABT00000000 data, contig 2.42.	0.512
SMAC_01699	SMAC_07357	F7VRL4	F7W8K3	WGS project CABT00000000 data, contig 2.5.	WGS project CABT00000000 data, contig 2.45.	0.426
SMAC_01699	SMAC_07753	F7VRL4	F7W8X3	WGS project CABT00000000 data, contig 2.5.	WGS project CABT00000000 data, contig 2.47; Belongs to the adenylate kinase family.	0.426