STRINGSTRING
SMAC_07643 SMAC_07643 SMAC_03713 SMAC_03713 SMAC_02504 SMAC_02504 SMAC_00221 SMAC_00221 SMAC_00145 SMAC_00145 SMAC_10080 SMAC_10080 SMAC_07315 SMAC_07315
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_07643Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (550 aa)
SMAC_03713Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (480 aa)
SMAC_02504WGS project CABT00000000 data, contig 2.3. (447 aa)
SMAC_00221WGS project CABT00000000 data, contig 2.1. (385 aa)
SMAC_00145WGS project CABT00000000 data, contig 2.1; Belongs to the dihydrofolate reductase family. (223 aa)
SMAC_10080WGS project CABT00000000 data, contig 2.323. (301 aa)
SMAC_07315WGS project CABT00000000 data, contig 2.44; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (495 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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