STRINGSTRING
SMAC_00221 SMAC_00221 SMAC_07383 SMAC_07383 SMAC_01246 SMAC_01246 SMAC_03146 SMAC_03146 SMAC_02611 SMAC_02611 SMAC_06449 SMAC_06449 SMAC_07850 SMAC_07850 SMAC_04083 SMAC_04083 SMAC_03900 SMAC_03900 SMAC_05655 SMAC_05655 SMAC_06351 SMAC_06351 SMAC_07270 SMAC_07270 SMAC_08869 SMAC_08869 SMAC_08873 SMAC_08873
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_00221WGS project CABT00000000 data, contig 2.1. (385 aa)
SMAC_07383Threonine dehydratase. (523 aa)
SMAC_01246WGS project CABT00000000 data, contig 2.4. (362 aa)
SMAC_03146WGS project CABT00000000 data, contig 2.7. (393 aa)
SMAC_02611WGS project CABT00000000 data, contig 2.11. (376 aa)
SMAC_06449WGS project CABT00000000 data, contig 2.13; Belongs to the aldehyde dehydrogenase family. (495 aa)
SMAC_07850WGS project CABT00000000 data, contig 2.14. (359 aa)
SMAC_04083WGS project CABT00000000 data, contig 2.15. (486 aa)
SMAC_03900WGS project CABT00000000 data, contig 2.16; Belongs to the aldehyde dehydrogenase family. (479 aa)
SMAC_05655WGS project CABT00000000 data, contig 2.30. (437 aa)
SMAC_06351Homoserine dehydrogenase. (348 aa)
SMAC_07270WGS project CABT00000000 data, contig 2.44; Belongs to the aldehyde dehydrogenase family. (484 aa)
SMAC_08869WGS project CABT00000000 data, contig 2.67; Belongs to the aldehyde dehydrogenase family. (474 aa)
SMAC_08873WGS project CABT00000000 data, contig 2.67. (554 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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