STRINGSTRING
SMAC_02366 SMAC_02366 SMAC_04834 SMAC_04834 SMAC_08139 SMAC_08139 SMAC_01628 SMAC_01628 SMAC_01902 SMAC_01902 SMAC_07530 SMAC_07530 SMAC_04991 SMAC_04991 SMAC_03269 SMAC_03269 SMAC_02605 SMAC_02605 SMAC_12089 SMAC_12089 SMAC_04156 SMAC_04156 SMAC_02086 SMAC_02086 SMAC_04612 SMAC_04612 SMAC_04794 SMAC_04794 SMAC_02229 SMAC_02229 SMAC_02273 SMAC_02273 SMAC_05588 SMAC_05588 SMAC_06619 SMAC_06619 SMAC_07336 SMAC_07336 SMAC_08477 SMAC_08477 SMAC_08688 SMAC_08688
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_023663-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the N-terminal section; belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. In the 3rd section; belongs to the shikimate kinase family. In the C-terminal section; belongs to the shikimate dehydrogenase family. (1563 aa)
SMAC_04834Phospho-2-dehydro-3-deoxyheptonate aldolase; Belongs to the class-II DAHP synthase family. (478 aa)
SMAC_08139Tryptophan synthase. (708 aa)
SMAC_01628WGS project CABT00000000 data, contig 2.4. (573 aa)
SMAC_01902Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family. (445 aa)
SMAC_07530WGS project CABT00000000 data, contig 2.7. (797 aa)
SMAC_04991WGS project CABT00000000 data, contig 2.8. (240 aa)
SMAC_03269Phospho-2-dehydro-3-deoxyheptonate aldolase. (379 aa)
SMAC_02605WGS project CABT00000000 data, contig 2.11. (700 aa)
SMAC_12089WGS project CABT00000000 data, contig 2.13. (366 aa)
SMAC_04156Chorismate synthase. (432 aa)
SMAC_02086WGS project CABT00000000 data, contig 2.18. (229 aa)
SMAC_04612WGS project CABT00000000 data, contig 2.20. (558 aa)
SMAC_04794Chorismate mutase. (269 aa)
SMAC_02229WGS project CABT00000000 data, contig 2.23. (743 aa)
SMAC_022731-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase. (257 aa)
SMAC_05588WGS project CABT00000000 data, contig 2.26. (760 aa)
SMAC_06619WGS project CABT00000000 data, contig 2.37. (972 aa)
SMAC_07336WGS project CABT00000000 data, contig 2.45. (436 aa)
SMAC_08477Phospho-2-dehydro-3-deoxyheptonate aldolase. (373 aa)
SMAC_08688WGS project CABT00000000 data, contig 2.63. (582 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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