STRINGSTRING
SMAC_04876 SMAC_04876 SMAC_00601 SMAC_00601 SMAC_00482 SMAC_00482 SMAC_06728 SMAC_06728 SMAC_06768 SMAC_06768 SMAC_01257 SMAC_01257 SMAC_01582 SMAC_01582 SMAC_01608 SMAC_01608 SMAC_09463 SMAC_09463 SMAC_01788 SMAC_01788 SMAC_06810 SMAC_06810 SMAC_05807 SMAC_05807 SMAC_07542 SMAC_07542 SMAC_03156 SMAC_03156 SMAC_03493 SMAC_03493 SMAC_02664 SMAC_02664 SMAC_06654 SMAC_06654 SMAC_06445 SMAC_06445 SMAC_04467 SMAC_04467 SMAC_04462 SMAC_04462 SMAC_07823 SMAC_07823 SMAC_04158 SMAC_04158 SMAC_03927 SMAC_03927 SMAC_03977 SMAC_03977 SMAC_04008 SMAC_04008 SMAC_04363 SMAC_04363 SMAC_02199 SMAC_02199 SMAC_05922 SMAC_05922 SMAC_05357 SMAC_05357 SMAC_05365 SMAC_05365 SMAC_05632 SMAC_05632 SMAC_06088 SMAC_06088 SMAC_06423 SMAC_06423 SMAC_06625 SMAC_06625 SMAC_06942 SMAC_06942 SMAC_07161 SMAC_07161 SMAC_07218 SMAC_07218 SMAC_07290 SMAC_07290 SMAC_07507 SMAC_07507 SMAC_08257 SMAC_08257 SMAC_07391 SMAC_07391 SMAC_00646 SMAC_00646 SMAC_00723 SMAC_00723 SMAC_00885 SMAC_00885 SMAC_02300 SMAC_02300 SMAC_02329 SMAC_02329 SMAC_02371 SMAC_02371 SMAC_02429 SMAC_02429 SMAC_06724 SMAC_06724
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_04876WGS project CABT00000000 data, contig 2.1. (411 aa)
SMAC_00601WGS project CABT00000000 data, contig 2.1. (1101 aa)
SMAC_00482WGS project CABT00000000 data, contig 2.1. (903 aa)
SMAC_06728WGS project CABT00000000 data, contig 2.3. (1226 aa)
SMAC_06768WGS project CABT00000000 data, contig 2.3; Belongs to the syntaxin family. (273 aa)
SMAC_01257WGS project CABT00000000 data, contig 2.4. (117 aa)
SMAC_01582WGS project CABT00000000 data, contig 2.4. (220 aa)
SMAC_01608WGS project CABT00000000 data, contig 2.4. (203 aa)
SMAC_09463WGS project CABT00000000 data, contig 2.5. (492 aa)
SMAC_01788Putative LSB6 protein. (863 aa)
SMAC_06810WGS project CABT00000000 data, contig 2.6. (317 aa)
SMAC_05807WGS project CABT00000000 data, contig 2.6. (1672 aa)
SMAC_07542WGS project CABT00000000 data, contig 2.7. (251 aa)
SMAC_03156WGS project CABT00000000 data, contig 2.7. (555 aa)
SMAC_03493WGS project CABT00000000 data, contig 2.9. (913 aa)
SMAC_02664Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. (2034 aa)
SMAC_06654WGS project CABT00000000 data, contig 2.13. (603 aa)
SMAC_06445WGS project CABT00000000 data, contig 2.13; Belongs to the small GTPase superfamily. SAR1 family. (202 aa)
SMAC_04467WGS project CABT00000000 data, contig 2.14; Belongs to the syntaxin family. (362 aa)
SMAC_04462WGS project CABT00000000 data, contig 2.14. (1272 aa)
SMAC_07823WGS project CABT00000000 data, contig 2.14. (434 aa)
SMAC_04158E3 ubiquitin-protein ligase PEP5. (1017 aa)
SMAC_03927WGS project CABT00000000 data, contig 2.17; Belongs to the ubiquitin-conjugating enzyme family. (235 aa)
SMAC_03977WGS project CABT00000000 data, contig 2.17. (226 aa)
SMAC_04008Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (775 aa)
SMAC_04363Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (227 aa)
SMAC_02199WGS project CABT00000000 data, contig 2.23. (647 aa)
SMAC_05922WGS project CABT00000000 data, contig 2.24. (1053 aa)
SMAC_05357WGS project CABT00000000 data, contig 2.25. (973 aa)
SMAC_05365WGS project CABT00000000 data, contig 2.25; Belongs to the STXBP/unc-18/SEC1 family. (589 aa)
SMAC_05632Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex. (266 aa)
SMAC_06088WGS project CABT00000000 data, contig 2.32. (221 aa)
SMAC_06423WGS project CABT00000000 data, contig 2.35. (350 aa)
SMAC_06625WGS project CABT00000000 data, contig 2.37; Belongs to the synaptobrevin family. (217 aa)
SMAC_06942WGS project CABT00000000 data, contig 2.38. (147 aa)
SMAC_07161WGS project CABT00000000 data, contig 2.40. (487 aa)
SMAC_07218Putative heterokaryon incompatibility protein. (293 aa)
SMAC_07290WGS project CABT00000000 data, contig 2.44. (777 aa)
SMAC_07507WGS project CABT00000000 data, contig 2.46. (1332 aa)
SMAC_08257WGS project CABT00000000 data, contig 2.56. (193 aa)
SMAC_07391WGS project CABT00000000 data, contig 2.1. (465 aa)
SMAC_00646WGS project CABT00000000 data, contig 2.2; Belongs to the WD repeat SEC13 family. (305 aa)
SMAC_00723WGS project CABT00000000 data, contig 2.2. (337 aa)
SMAC_00885WGS project CABT00000000 data, contig 2.2. (367 aa)
SMAC_02300WGS project CABT00000000 data, contig 2.3. (1154 aa)
SMAC_02329WGS project CABT00000000 data, contig 2.3. (292 aa)
SMAC_02371WGS project CABT00000000 data, contig 2.3. (1170 aa)
SMAC_02429WGS project CABT00000000 data, contig 2.3. (182 aa)
SMAC_06724WGS project CABT00000000 data, contig 2.3. (217 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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