STRINGSTRING
SMAC_01918 SMAC_01918 SMAC_07495 SMAC_07495 SMAC_06115 SMAC_06115 SMAC_06551 SMAC_06551 SMAC_05080 SMAC_05080 SMAC_09068 SMAC_09068 SMAC_08406 SMAC_08406
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_01918WGS project CABT00000000 data, contig 2.5. (258 aa)
SMAC_07495WGS project CABT00000000 data, contig 2.46. (499 aa)
SMAC_06115WGS project CABT00000000 data, contig 2.33. (465 aa)
SMAC_06551WGS project CABT00000000 data, contig 2.28. (482 aa)
SMAC_05080WGS project CABT00000000 data, contig 2.22. (528 aa)
SMAC_09068WGS project CABT00000000 data, contig 2.8. (421 aa)
SMAC_08406WGS project CABT00000000 data, contig 2.57. (1448 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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