STRINGSTRING
SMAC_08306 SMAC_08306 SMAC_04324 SMAC_04324 SMAC_03745 SMAC_03745 SMAC_02868 SMAC_02868
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_08306WGS project CABT00000000 data, contig 2.9. (633 aa)
SMAC_04324WGS project CABT00000000 data, contig 2.19. (611 aa)
SMAC_03745WGS project CABT00000000 data, contig 2.16. (848 aa)
SMAC_02868WGS project CABT00000000 data, contig 2.12. (830 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.