STRINGSTRING
SMAC_00523 SMAC_00523 SMAC_06788 SMAC_06788 SMAC_03060 SMAC_03060 SMAC_02043 SMAC_02043 SMAC_02044 SMAC_02044 SMAC_05096 SMAC_05096 SMAC_06287 SMAC_06287
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_00523WGS project CABT00000000 data, contig 2.1; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (323 aa)
SMAC_06788WGS project CABT00000000 data, contig 2.3. (820 aa)
SMAC_03060WGS project CABT00000000 data, contig 2.7; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (302 aa)
SMAC_02043WGS project CABT00000000 data, contig 2.18. (107 aa)
SMAC_02044WGS project CABT00000000 data, contig 2.18. (300 aa)
SMAC_05096WGS project CABT00000000 data, contig 2.22. (471 aa)
SMAC_06287GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins. (342 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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