STRINGSTRING
SMAC_04519 SMAC_04519 SMAC_02119 SMAC_02119 SMAC_00471 SMAC_00471 SMAC_04918 SMAC_04918 SMAC_04929 SMAC_04929 SMAC_04930 SMAC_04930 SMAC_06584 SMAC_06584 SMAC_06583 SMAC_06583 SMAC_06323 SMAC_06323 SMAC_06189 SMAC_06189 SMAC_06117 SMAC_06117 SMAC_06034 SMAC_06034 SMAC_05632 SMAC_05632 SMAC_06515 SMAC_06515 SMAC_06514 SMAC_06514 SMAC_06512 SMAC_06512 SMAC_05602 SMAC_05602 SMAC_05370 SMAC_05370 SMAC_05347 SMAC_05347 SMAC_05922 SMAC_05922 SMAC_02199 SMAC_02199 SMAC_05058 SMAC_05058 SMAC_00388 SMAC_00388 SMAC_00076 SMAC_00076 VMA21 VMA21 SMAC_04578 SMAC_04578 SMAC_04722 SMAC_04722 SMAC_04579 SMAC_04579 SMAC_04008 SMAC_04008 SMAC_03977 SMAC_03977 SMAC_03887 SMAC_03887 SMAC_04406 SMAC_04406 SMAC_04424 SMAC_04424 SMAC_04465 SMAC_04465 SMAC_04467 SMAC_04467 SMAC_04471 SMAC_04471 SMAC_06444 SMAC_06444 SMAC_06445 SMAC_06445 SMAC_06499 SMAC_06499 SMAC_12600 SMAC_12600 SMAC_02936 SMAC_02936 SMAC_02852 SMAC_02852 SMAC_02726 SMAC_02726 PSD2 PSD2 SMAC_02690 SMAC_02690 SMAC_02664 SMAC_02664 SMAC_02543 SMAC_02543 SMAC_03471 SMAC_03471 SMAC_03535 SMAC_03535 SMAC_03493 SMAC_03493 SMAC_08299 SMAC_08299 SMAC_08312 SMAC_08312 SMAC_04978 SMAC_04978 SMAC_04962 SMAC_04962 SMAC_03013 SMAC_03013 SMAC_08352 SMAC_08352 SMAC_06001 SMAC_06001 SMAC_05963 SMAC_05963 SMAC_05829 SMAC_05829 SMAC_05435 SMAC_05435 SMAC_12098 SMAC_12098 SMAC_06857 SMAC_06857 SMAC_01924 SMAC_01924 SMAC_01872 SMAC_01872 SMAC_01826 SMAC_01826 SMAC_01800 SMAC_01800 SMAC_01799 SMAC_01799 SMAC_01797 SMAC_01797 SMAC_09463 SMAC_09463 SMAC_01582 SMAC_01582 SMAC_01495 SMAC_01495 SMAC_01405 SMAC_01405 SMAC_06728 SMAC_06728 SMAC_06724 SMAC_06724 SMAC_02473 SMAC_02473 SMAC_06942 SMAC_06942 SMAC_06625 SMAC_06625 SMAC_06620 SMAC_06620 SMAC_00646 SMAC_00646 SMAC_00408 SMAC_00408 SMAC_02371 SMAC_02371 SMAC_01000 SMAC_01000 SMAC_09604 SMAC_09604 SMAC_08168 SMAC_08168 SMAC_08160 SMAC_08160 SMAC_09495 SMAC_09495 SMAC_05046 SMAC_05046 SMAC_09496 SMAC_09496 SMAC_07470 SMAC_07470 SMAC_07343 SMAC_07343 SMAC_07290 SMAC_07290 SMAC_07218 SMAC_07218 SMAC_07783 SMAC_07783 SMAC_07174 SMAC_07174 SMAC_07169 SMAC_07169 SMAC_07161 SMAC_07161
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_04519WGS project CABT00000000 data, contig 2.20. (370 aa)
SMAC_02119Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (274 aa)
SMAC_00471WGS project CABT00000000 data, contig 2.1. (1174 aa)
SMAC_04918WGS project CABT00000000 data, contig 2.1; Belongs to the small GTPase superfamily. Arf family. (183 aa)
SMAC_04929WGS project CABT00000000 data, contig 2.1. (154 aa)
SMAC_04930WGS project CABT00000000 data, contig 2.1. (470 aa)
SMAC_06584WGS project CABT00000000 data, contig 2.37. (286 aa)
SMAC_06583WGS project CABT00000000 data, contig 2.37. (484 aa)
SMAC_06323WGS project CABT00000000 data, contig 2.34. (234 aa)
SMAC_06189Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. (722 aa)
SMAC_06117E3 ubiquitin-protein ligase. (819 aa)
SMAC_06034AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (752 aa)
SMAC_05632Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex. (266 aa)
SMAC_06515WGS project CABT00000000 data, contig 2.28. (338 aa)
SMAC_06514WGS project CABT00000000 data, contig 2.28. (737 aa)
SMAC_06512AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (161 aa)
SMAC_05602WGS project CABT00000000 data, contig 2.26. (318 aa)
SMAC_05370WGS project CABT00000000 data, contig 2.25. (392 aa)
SMAC_05347WGS project CABT00000000 data, contig 2.25. (1510 aa)
SMAC_05922WGS project CABT00000000 data, contig 2.24. (1053 aa)
SMAC_02199WGS project CABT00000000 data, contig 2.23. (647 aa)
SMAC_05058WGS project CABT00000000 data, contig 2.22; Belongs to the adaptor complexes medium subunit family. (452 aa)
SMAC_00388WGS project CABT00000000 data, contig 2.1. (696 aa)
SMAC_00076WGS project CABT00000000 data, contig 2.1. (620 aa)
VMA21Vacuolar ATPase assembly integral membrane protein VMA21; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum; Belongs to the VMA21 family. (118 aa)
SMAC_04578WGS project CABT00000000 data, contig 2.20. (472 aa)
SMAC_04722WGS project CABT00000000 data, contig 2.21. (641 aa)
SMAC_04579WGS project CABT00000000 data, contig 2.20. (188 aa)
SMAC_04008Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (775 aa)
SMAC_03977WGS project CABT00000000 data, contig 2.17. (226 aa)
SMAC_03887WGS project CABT00000000 data, contig 2.16. (175 aa)
SMAC_04406WGS project CABT00000000 data, contig 2.14. (173 aa)
SMAC_04424WGS project CABT00000000 data, contig 2.14. (403 aa)
SMAC_04465AP-1 complex subunit gamma. (835 aa)
SMAC_04467WGS project CABT00000000 data, contig 2.14; Belongs to the syntaxin family. (362 aa)
SMAC_04471Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (244 aa)
SMAC_06444WGS project CABT00000000 data, contig 2.13. (716 aa)
SMAC_06445WGS project CABT00000000 data, contig 2.13; Belongs to the small GTPase superfamily. SAR1 family. (202 aa)
SMAC_06499WGS project CABT00000000 data, contig 2.13; Belongs to the peptidase C2 family. (920 aa)
SMAC_12600WGS project CABT00000000 data, contig 2.12. (283 aa)
SMAC_02936WGS project CABT00000000 data, contig 2.12. (499 aa)
SMAC_02852WGS project CABT00000000 data, contig 2.12. (514 aa)
SMAC_02726Putative PI phosphatase group protein. (1051 aa)
PSD2Phosphatidylserine decarboxylase 2 alpha chain; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. (774 aa)
SMAC_02690Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (296 aa)
SMAC_02664Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. (2034 aa)
SMAC_02543WGS project CABT00000000 data, contig 2.11. (504 aa)
SMAC_03471WGS project CABT00000000 data, contig 2.10. (721 aa)
SMAC_03535Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1229 aa)
SMAC_03493WGS project CABT00000000 data, contig 2.9. (913 aa)
SMAC_08299WGS project CABT00000000 data, contig 2.9. (922 aa)
SMAC_08312Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (911 aa)
SMAC_04978Putative FAB1 protein. (2584 aa)
SMAC_04962Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (237 aa)
SMAC_03013Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (915 aa)
SMAC_08352AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane. (1069 aa)
SMAC_06001WGS project CABT00000000 data, contig 2.6. (379 aa)
SMAC_05963Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1687 aa)
SMAC_05829Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (208 aa)
SMAC_05435Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (916 aa)
SMAC_12098WGS project CABT00000000 data, contig 2.6. (142 aa)
SMAC_06857WGS project CABT00000000 data, contig 2.6. (214 aa)
SMAC_01924Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (490 aa)
SMAC_01872WGS project CABT00000000 data, contig 2.5. (227 aa)
SMAC_01826AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (143 aa)
SMAC_01800WGS project CABT00000000 data, contig 2.5; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1873 aa)
SMAC_01799Putative chitin synthase 6. (1821 aa)
SMAC_01797WGS project CABT00000000 data, contig 2.5. (276 aa)
SMAC_09463WGS project CABT00000000 data, contig 2.5. (492 aa)
SMAC_01582WGS project CABT00000000 data, contig 2.4. (220 aa)
SMAC_01495WGS project CABT00000000 data, contig 2.4. (404 aa)
SMAC_01405WGS project CABT00000000 data, contig 2.4. (495 aa)
SMAC_06728WGS project CABT00000000 data, contig 2.3. (1226 aa)
SMAC_06724WGS project CABT00000000 data, contig 2.3. (217 aa)
SMAC_02473WGS project CABT00000000 data, contig 2.3. (235 aa)
SMAC_06942WGS project CABT00000000 data, contig 2.38. (147 aa)
SMAC_06625WGS project CABT00000000 data, contig 2.37; Belongs to the synaptobrevin family. (217 aa)
SMAC_06620WGS project CABT00000000 data, contig 2.37. (129 aa)
SMAC_00646WGS project CABT00000000 data, contig 2.2; Belongs to the WD repeat SEC13 family. (305 aa)
SMAC_00408WGS project CABT00000000 data, contig 2.1. (863 aa)
SMAC_02371WGS project CABT00000000 data, contig 2.3. (1170 aa)
SMAC_01000Putative Eps15-like protein pan1p. (396 aa)
SMAC_09604Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (739 aa)
SMAC_08168AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (194 aa)
SMAC_08160WGS project CABT00000000 data, contig 2.53. (1257 aa)
SMAC_09495AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (884 aa)
SMAC_05046WGS project CABT00000000 data, contig 2.22; Belongs to the adaptor complexes medium subunit family. (436 aa)
SMAC_09496WGS project CABT00000000 data, contig 2.51. (475 aa)
SMAC_07470WGS project CABT00000000 data, contig 2.46; Belongs to the AAA ATPase family. (382 aa)
SMAC_07343Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (957 aa)
SMAC_07290WGS project CABT00000000 data, contig 2.44. (777 aa)
SMAC_07218Putative heterokaryon incompatibility protein. (293 aa)
SMAC_07783WGS project CABT00000000 data, contig 2.41. (375 aa)
SMAC_07174WGS project CABT00000000 data, contig 2.40. (257 aa)
SMAC_07169AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (765 aa)
SMAC_07161WGS project CABT00000000 data, contig 2.40. (487 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.