STRINGSTRING
SMAC_08261 SMAC_08261 SMAC_00085 SMAC_00085 SMAC_02308 SMAC_02308 SMAC_02432 SMAC_02432 SMAC_01437 SMAC_01437 SMAC_05470 SMAC_05470 SMAC_04617 SMAC_04617 SMAC_05068 SMAC_05068 SMAC_06027 SMAC_06027 SMAC_06310 SMAC_06310 SMAC_07040 SMAC_07040 SMAC_07507 SMAC_07507 SMAC_08036 SMAC_08036
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_08261WGS project CABT00000000 data, contig 2.56. (859 aa)
SMAC_00085Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology. (859 aa)
SMAC_02308WGS project CABT00000000 data, contig 2.3. (96 aa)
SMAC_02432WGS project CABT00000000 data, contig 2.3. (797 aa)
SMAC_01437WGS project CABT00000000 data, contig 2.4. (432 aa)
SMAC_05470WGS project CABT00000000 data, contig 2.6. (686 aa)
SMAC_04617WGS project CABT00000000 data, contig 2.20; Belongs to the STXBP/unc-18/SEC1 family. (666 aa)
SMAC_05068WGS project CABT00000000 data, contig 2.22. (178 aa)
SMAC_06027WGS project CABT00000000 data, contig 2.32. (184 aa)
SMAC_06310WGS project CABT00000000 data, contig 2.34. (127 aa)
SMAC_07040WGS project CABT00000000 data, contig 2.36. (559 aa)
SMAC_07507WGS project CABT00000000 data, contig 2.46. (1332 aa)
SMAC_08036WGS project CABT00000000 data, contig 2.50. (816 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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