STRINGSTRING
SMAC_08785 SMAC_08785 SMAC_03872 SMAC_03872 SMAC_02022 SMAC_02022 SMAC_04292 SMAC_04292 SMAC_05597 SMAC_05597 SMAC_08720 SMAC_08720 SMAC_00316 SMAC_00316 SMAC_12092 SMAC_12092 SMAC_03504 SMAC_03504 PSD1 PSD1 PSD2 PSD2 SMAC_12598 SMAC_12598 SMAC_02941 SMAC_02941
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_08785WGS project CABT00000000 data, contig 2.15. (357 aa)
SMAC_03872WGS project CABT00000000 data, contig 2.16. (253 aa)
SMAC_02022WGS project CABT00000000 data, contig 2.18. (445 aa)
SMAC_04292WGS project CABT00000000 data, contig 2.19. (441 aa)
SMAC_05597WGS project CABT00000000 data, contig 2.26. (451 aa)
SMAC_08720WGS project CABT00000000 data, contig 2.64. (460 aa)
SMAC_00316WGS project CABT00000000 data, contig 2.1. (286 aa)
SMAC_12092WGS project CABT00000000 data, contig 2.2. (373 aa)
SMAC_03504CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (249 aa)
PSD1Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily. (532 aa)
PSD2Phosphatidylserine decarboxylase 2 alpha chain; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. (774 aa)
SMAC_12598WGS project CABT00000000 data, contig 2.12. (670 aa)
SMAC_02941WGS project CABT00000000 data, contig 2.12; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (430 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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