STRINGSTRING
SMAC_01181 SMAC_01181 SMAC_05597 SMAC_05597 SMAC_06307 SMAC_06307 SMAC_07265 SMAC_07265
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_01181WGS project CABT00000000 data, contig 2.2. (549 aa)
SMAC_05597WGS project CABT00000000 data, contig 2.26. (451 aa)
SMAC_06307WGS project CABT00000000 data, contig 2.34. (525 aa)
SMAC_07265Phosphatidate cytidylyltransferase; Belongs to the CDS family. (460 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.