STRINGSTRING
SMAC_05357 SMAC_05357 SMAC_07507 SMAC_07507 SMAC_05963 SMAC_05963 SMAC_04158 SMAC_04158 SMAC_02300 SMAC_02300
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_05357WGS project CABT00000000 data, contig 2.25. (973 aa)
SMAC_07507WGS project CABT00000000 data, contig 2.46. (1332 aa)
SMAC_05963Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1687 aa)
SMAC_04158E3 ubiquitin-protein ligase PEP5. (1017 aa)
SMAC_02300WGS project CABT00000000 data, contig 2.3. (1154 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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