STRINGSTRING
SMAC_01127 SMAC_01127 SMAC_01204 SMAC_01204 SMAC_01005 SMAC_01005 SMAC_03212 SMAC_03212 SMAC_05051 SMAC_05051 SMAC_06126 SMAC_06126
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_01127WGS project CABT00000000 data, contig 2.2. (741 aa)
SMAC_01204Phospholipase. (915 aa)
SMAC_01005Phospholipase. (997 aa)
SMAC_03212CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Functions in the biosynthesis of the anionic phospholipids phosphatidylglycerol and cardiolipin; Belongs to the CDP-alcohol phosphatidyltransferase class-II family. (532 aa)
SMAC_05051WGS project CABT00000000 data, contig 2.22. (521 aa)
SMAC_06126WGS project CABT00000000 data, contig 2.33. (1890 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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