STRINGSTRING
SMAC_00542 SMAC_00542 SMAC_01241 SMAC_01241 SMAC_01776 SMAC_01776 SMAC_08329 SMAC_08329 SMAC_02671 SMAC_02671 SMAC_04477 SMAC_04477 SMAC_04035 SMAC_04035 SMAC_02072 SMAC_02072 SMAC_05712 SMAC_05712 SMAC_09020 SMAC_09020 SMAC_07466 SMAC_07466
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_00542WGS project CABT00000000 data, contig 2.131. (256 aa)
SMAC_01241WGS project CABT00000000 data, contig 2.4; Belongs to the GST superfamily. (342 aa)
SMAC_01776WGS project CABT00000000 data, contig 2.5; Belongs to the GST superfamily. (364 aa)
SMAC_08329WGS project CABT00000000 data, contig 2.7. (689 aa)
SMAC_02671WGS project CABT00000000 data, contig 2.11. (403 aa)
SMAC_04477WGS project CABT00000000 data, contig 2.14. (255 aa)
SMAC_04035WGS project CABT00000000 data, contig 2.17. (364 aa)
SMAC_02072WGS project CABT00000000 data, contig 2.18; Belongs to the GST superfamily. (274 aa)
SMAC_05712WGS project CABT00000000 data, contig 2.30. (242 aa)
SMAC_09020WGS project CABT00000000 data, contig 2.31; Belongs to the GST superfamily. (240 aa)
SMAC_07466WGS project CABT00000000 data, contig 2.46; Belongs to the GST superfamily. (241 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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