STRINGSTRING
SMAC_06586 SMAC_06586 SMAC_04468 SMAC_04468 SMAC_07383 SMAC_07383 SMAC_02388 SMAC_02388 SMAC_03452 SMAC_03452 SMAC_12089 SMAC_12089 SMAC_08524 SMAC_08524 SMAC_11153 SMAC_11153 SMAC_04507 SMAC_04507
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_06586WGS project CABT00000000 data, contig 2.37. (443 aa)
SMAC_04468Aspartokinase. (523 aa)
SMAC_07383Threonine dehydratase. (523 aa)
SMAC_02388WGS project CABT00000000 data, contig 2.3. (318 aa)
SMAC_03452D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (652 aa)
SMAC_12089WGS project CABT00000000 data, contig 2.13. (366 aa)
SMAC_08524WGS project CABT00000000 data, contig 2.54. (286 aa)
SMAC_11153WGS project CABT00000000 data, contig 2.628. (106 aa)
SMAC_04507D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (466 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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