(11 nodes) PLC beta mediated events network (Sordaria macrospora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SMAC_03469	WGS project CABT00000000 data, contig 2.10. (400 aa)
	SMAC_02871	Lysophospholipase. (634 aa)
	SMAC_03962	Phosphoinositide phospholipase C. (1151 aa)
	SMAC_05352	WGS project CABT00000000 data, contig 2.25. (795 aa)
	SMAC_07075	Phosphoinositide phospholipase C. (749 aa)
	SMAC_07080	WGS project CABT00000000 data, contig 2.39. (534 aa)
	SMAC_07255	WGS project CABT00000000 data, contig 2.42. (1227 aa)
	SMAC_07277	Phosphoinositide phospholipase C. (606 aa)
	SMAC_03233	cAMP-dependent protein kinase regulatory subunit. (385 aa)
	SMAC_05273	Phosphoinositide phospholipase C. (587 aa)
	SMAC_02721	WGS project CABT00000000 data, contig 2.11. (899 aa)

Your Current Organism:

Sordaria macrospora

NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SMAC_02721	SMAC_03233	F7VXA1	F7VTV1	WGS project CABT00000000 data, contig 2.11.	cAMP-dependent protein kinase regulatory subunit.	0.927
SMAC_03233	SMAC_02721	F7VTV1	F7VXA1	cAMP-dependent protein kinase regulatory subunit.	WGS project CABT00000000 data, contig 2.11.	0.927
SMAC_03233	SMAC_03469	F7VTV1	F7VW91	cAMP-dependent protein kinase regulatory subunit.	WGS project CABT00000000 data, contig 2.10.	0.939
SMAC_03233	SMAC_07080	F7VTV1	F7W7H2	cAMP-dependent protein kinase regulatory subunit.	WGS project CABT00000000 data, contig 2.39.	0.997
SMAC_03469	SMAC_03233	F7VW91	F7VTV1	WGS project CABT00000000 data, contig 2.10.	cAMP-dependent protein kinase regulatory subunit.	0.939
SMAC_05352	SMAC_07255	F7W3M4	F7W844	WGS project CABT00000000 data, contig 2.25.	WGS project CABT00000000 data, contig 2.42.	0.658
SMAC_07080	SMAC_03233	F7W7H2	F7VTV1	WGS project CABT00000000 data, contig 2.39.	cAMP-dependent protein kinase regulatory subunit.	0.997
SMAC_07255	SMAC_05352	F7W844	F7W3M4	WGS project CABT00000000 data, contig 2.42.	WGS project CABT00000000 data, contig 2.25.	0.658