STRINGSTRING
SMAC_01396 SMAC_01396 SMAC_01395 SMAC_01395 SMAC_08117 SMAC_08117 SMAC_01230 SMAC_01230 SMAC_06907 SMAC_06907 SMAC_05619 SMAC_05619 SMAC_05052 SMAC_05052 SMAC_05047 SMAC_05047 SMAC_04348 SMAC_04348 SMAC_08869 SMAC_08869 SMAC_07270 SMAC_07270 SMAC_03900 SMAC_03900 SMAC_04083 SMAC_04083 SMAC_06449 SMAC_06449 SMAC_09304 SMAC_09304 SMAC_03043 SMAC_03043
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_01396WGS project CABT00000000 data, contig 2.4; Belongs to the aldehyde dehydrogenase family. (334 aa)
SMAC_01395WGS project CABT00000000 data, contig 2.4. (155 aa)
SMAC_08117WGS project CABT00000000 data, contig 2.3. (595 aa)
SMAC_01230WGS project CABT00000000 data, contig 2.4. (524 aa)
SMAC_06907Glucanase; Belongs to the glycosyl hydrolase family 6. (398 aa)
SMAC_05619WGS project CABT00000000 data, contig 2.30. (685 aa)
SMAC_05052Glucanase; Belongs to the glycosyl hydrolase family 6. (480 aa)
SMAC_05047WGS project CABT00000000 data, contig 2.22. (246 aa)
SMAC_04348WGS project CABT00000000 data, contig 2.19. (529 aa)
SMAC_08869WGS project CABT00000000 data, contig 2.67; Belongs to the aldehyde dehydrogenase family. (474 aa)
SMAC_07270WGS project CABT00000000 data, contig 2.44; Belongs to the aldehyde dehydrogenase family. (484 aa)
SMAC_03900WGS project CABT00000000 data, contig 2.16; Belongs to the aldehyde dehydrogenase family. (479 aa)
SMAC_04083WGS project CABT00000000 data, contig 2.15. (486 aa)
SMAC_06449WGS project CABT00000000 data, contig 2.13; Belongs to the aldehyde dehydrogenase family. (495 aa)
SMAC_09304WGS project CABT00000000 data, contig 2.10; Belongs to the arylamine N-acetyltransferase family. (319 aa)
SMAC_03043WGS project CABT00000000 data, contig 2.7. (262 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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