(8 nodes) Acyl chain remodelling of PS network (Sordaria macrospora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SMAC_02871	Lysophospholipase. (634 aa)
	SMAC_02749	WGS project CABT00000000 data, contig 2.11. (331 aa)
	SMAC_03629	WGS project CABT00000000 data, contig 2.9; Belongs to the OSBP family. (402 aa)
	SMAC_00918	Lysophospholipase. (845 aa)
	SMAC_05367	WGS project CABT00000000 data, contig 2.25; Belongs to the membrane-bound acyltransferase family. (607 aa)
	SMAC_06422	WGS project CABT00000000 data, contig 2.35; Belongs to the OSBP family. (479 aa)
	SMAC_04218	WGS project CABT00000000 data, contig 2.19; Belongs to the OSBP family. (419 aa)
	SMAC_02977	WGS project CABT00000000 data, contig 2.12; Belongs to the OSBP family. (535 aa)

Your Current Organism:

Sordaria macrospora

NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SMAC_00918	SMAC_02871	F7VNG4	F7VXQ0	Lysophospholipase.	Lysophospholipase.	0.900
SMAC_00918	SMAC_05367	F7VNG4	F7W3N9	Lysophospholipase.	WGS project CABT00000000 data, contig 2.25; Belongs to the membrane-bound acyltransferase family.	0.902
SMAC_02749	SMAC_05367	F7VXD0	F7W3N9	WGS project CABT00000000 data, contig 2.11.	WGS project CABT00000000 data, contig 2.25; Belongs to the membrane-bound acyltransferase family.	0.962
SMAC_02871	SMAC_00918	F7VXQ0	F7VNG4	Lysophospholipase.	Lysophospholipase.	0.900
SMAC_02871	SMAC_05367	F7VXQ0	F7W3N9	Lysophospholipase.	WGS project CABT00000000 data, contig 2.25; Belongs to the membrane-bound acyltransferase family.	0.903
SMAC_05367	SMAC_00918	F7W3N9	F7VNG4	WGS project CABT00000000 data, contig 2.25; Belongs to the membrane-bound acyltransferase family.	Lysophospholipase.	0.902
SMAC_05367	SMAC_02749	F7W3N9	F7VXD0	WGS project CABT00000000 data, contig 2.25; Belongs to the membrane-bound acyltransferase family.	WGS project CABT00000000 data, contig 2.11.	0.962
SMAC_05367	SMAC_02871	F7W3N9	F7VXQ0	WGS project CABT00000000 data, contig 2.25; Belongs to the membrane-bound acyltransferase family.	Lysophospholipase.	0.903