STRINGSTRING
SMAC_02721 SMAC_02721 SMAC_07255 SMAC_07255 SMAC_07080 SMAC_07080 SMAC_03233 SMAC_03233 SMAC_03469 SMAC_03469 SMAC_05352 SMAC_05352
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_02721WGS project CABT00000000 data, contig 2.11. (899 aa)
SMAC_07255WGS project CABT00000000 data, contig 2.42. (1227 aa)
SMAC_07080WGS project CABT00000000 data, contig 2.39. (534 aa)
SMAC_03233cAMP-dependent protein kinase regulatory subunit. (385 aa)
SMAC_03469WGS project CABT00000000 data, contig 2.10. (400 aa)
SMAC_05352WGS project CABT00000000 data, contig 2.25. (795 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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