STRINGSTRING
SMAC_01524 SMAC_01524 SMAC_00930 SMAC_00930 SMAC_09309 SMAC_09309 SMAC_05360 SMAC_05360 SMAC_02248 SMAC_02248 SMAC_04653 SMAC_04653 SMAC_03769 SMAC_03769 SMAC_08524 SMAC_08524 SMAC_02914 SMAC_02914 URA3 URA3 SMAC_01699 SMAC_01699 SMAC_09163 SMAC_09163 SMAC_04380 SMAC_04380 SMAC_05569 SMAC_05569 SMAC_07224 SMAC_07224 SMAC_08088 SMAC_08088 SMAC_10630 SMAC_10630 SMAC_02892 SMAC_02892 SMAC_02848 SMAC_02848 SMAC_05730 SMAC_05730
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_01524WGS project CABT00000000 data, contig 2.4. (232 aa)
SMAC_00930WGS project CABT00000000 data, contig 2.2. (1832 aa)
SMAC_09309Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity). Belongs to the adenylosuccinate synthetase family. (430 aa)
SMAC_05360Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (461 aa)
SMAC_02248WGS project CABT00000000 data, contig 2.23. (762 aa)
SMAC_04653WGS project CABT00000000 data, contig 2.21. (753 aa)
SMAC_03769WGS project CABT00000000 data, contig 2.16. (1357 aa)
SMAC_08524WGS project CABT00000000 data, contig 2.54. (286 aa)
SMAC_02914Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily. (631 aa)
URA3Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. (396 aa)
SMAC_01699WGS project CABT00000000 data, contig 2.5. (233 aa)
SMAC_09163WGS project CABT00000000 data, contig 2.74. (520 aa)
SMAC_04380Amidophosphoribosyltransferase. (546 aa)
SMAC_05569Dihydroorotate dehydrogenase (fumarate); Catalyzes the conversion of dihydroorotate to orotate with fumarate as the electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily. (371 aa)
SMAC_07224WGS project CABT00000000 data, contig 2.42. (652 aa)
SMAC_08088WGS project CABT00000000 data, contig 2.52. (1008 aa)
SMAC_10630WGS project CABT00000000 data, contig 2.468. (173 aa)
SMAC_02892WGS project CABT00000000 data, contig 2.12. (378 aa)
SMAC_02848Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. (536 aa)
SMAC_05730WGS project CABT00000000 data, contig 2.6. (594 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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