STRINGSTRING
SMAC_05796 SMAC_05796 SMAC_07383 SMAC_07383 SMAC_08139 SMAC_08139 SMAC_08345 SMAC_08345 SMAC_03112 SMAC_03112 SMAC_02611 SMAC_02611 SMAC_02214 SMAC_02214 SMAC_08873 SMAC_08873 SMAC_09602 SMAC_09602 SMAC_09686 SMAC_09686 SMAC_09665 SMAC_09665
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_05796WGS project CABT00000000 data, contig 2.6. (421 aa)
SMAC_07383Threonine dehydratase. (523 aa)
SMAC_08139Tryptophan synthase. (708 aa)
SMAC_08345WGS project CABT00000000 data, contig 2.7. (360 aa)
SMAC_03112WGS project CABT00000000 data, contig 2.7. (383 aa)
SMAC_02611WGS project CABT00000000 data, contig 2.11. (376 aa)
SMAC_02214WGS project CABT00000000 data, contig 2.23. (376 aa)
SMAC_08873WGS project CABT00000000 data, contig 2.67. (554 aa)
SMAC_09602Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (527 aa)
SMAC_09686WGS project CABT00000000 data, contig 2.116. (525 aa)
SMAC_09665WGS project CABT00000000 data, contig 2.142. (370 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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