(8 nodes) Taurine and hypotaurine metabolism network (Sordaria macrospora)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	SMAC_02443	WGS project CABT00000000 data, contig 2.3. (613 aa)
	SMAC_12755	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (617 aa)
	SMAC_01357	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (619 aa)
	SMAC_01896	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (1050 aa)
	SMAC_04456	WGS project CABT00000000 data, contig 2.14. (603 aa)
	SMAC_04303	Probable acetate kinase. (461 aa)
	SMAC_04752	Cysteine dioxygenase. (231 aa)
	SMAC_06408	WGS project CABT00000000 data, contig 2.35. (546 aa)

Your Current Organism:

Sordaria macrospora

NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SMAC_01357	SMAC_01896	F7VQK9	F7VS62	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.953
SMAC_01357	SMAC_02443	F7VQK9	F7VPK9	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	WGS project CABT00000000 data, contig 2.3.	0.909
SMAC_01357	SMAC_04456	F7VQK9	F7VYV9	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	WGS project CABT00000000 data, contig 2.14.	0.909
SMAC_01357	SMAC_04752	F7VQK9	F7W2C0	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	Cysteine dioxygenase.	0.915
SMAC_01357	SMAC_06408	F7VQK9	F7W6Q0	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	WGS project CABT00000000 data, contig 2.35.	0.900
SMAC_01357	SMAC_12755	F7VQK9	F7VQ05	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	0.908
SMAC_01896	SMAC_01357	F7VS62	F7VQK9	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	0.953
SMAC_01896	SMAC_02443	F7VS62	F7VPK9	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	WGS project CABT00000000 data, contig 2.3.	0.833
SMAC_01896	SMAC_04456	F7VS62	F7VYV9	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	WGS project CABT00000000 data, contig 2.14.	0.833
SMAC_01896	SMAC_06408	F7VS62	F7W6Q0	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	WGS project CABT00000000 data, contig 2.35.	0.935
SMAC_01896	SMAC_12755	F7VS62	F7VQ05	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	0.953
SMAC_02443	SMAC_01357	F7VPK9	F7VQK9	WGS project CABT00000000 data, contig 2.3.	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	0.909
SMAC_02443	SMAC_01896	F7VPK9	F7VS62	WGS project CABT00000000 data, contig 2.3.	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.833
SMAC_02443	SMAC_04456	F7VPK9	F7VYV9	WGS project CABT00000000 data, contig 2.3.	WGS project CABT00000000 data, contig 2.14.	0.915
SMAC_02443	SMAC_06408	F7VPK9	F7W6Q0	WGS project CABT00000000 data, contig 2.3.	WGS project CABT00000000 data, contig 2.35.	0.909
SMAC_02443	SMAC_12755	F7VPK9	F7VQ05	WGS project CABT00000000 data, contig 2.3.	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	0.909
SMAC_04456	SMAC_01357	F7VYV9	F7VQK9	WGS project CABT00000000 data, contig 2.14.	Glutamate decarboxylase; Belongs to the group II decarboxylase family.	0.909
SMAC_04456	SMAC_01896	F7VYV9	F7VS62	WGS project CABT00000000 data, contig 2.14.	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.833
SMAC_04456	SMAC_02443	F7VYV9	F7VPK9	WGS project CABT00000000 data, contig 2.14.	WGS project CABT00000000 data, contig 2.3.	0.915
SMAC_04456	SMAC_06408	F7VYV9	F7W6Q0	WGS project CABT00000000 data, contig 2.14.	WGS project CABT00000000 data, contig 2.35.	0.909