STRINGSTRING
SMAC_02443 SMAC_02443 SMAC_01874 SMAC_01874 SMAC_03085 SMAC_03085 SMAC_03522 SMAC_03522 SMAC_03713 SMAC_03713 SMAC_03290 SMAC_03290 SMAC_03341 SMAC_03341 SMAC_04456 SMAC_04456 SMAC_04139 SMAC_04139 SMAC_04515 SMAC_04515 SMAC_02293 SMAC_02293 SMAC_05638 SMAC_05638 SMAC_07643 SMAC_07643 SMAC_06603 SMAC_06603 SMAC_06604 SMAC_06604 SMAC_08072 SMAC_08072 SMAC_08511 SMAC_08511
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_02443WGS project CABT00000000 data, contig 2.3. (613 aa)
SMAC_01874WGS project CABT00000000 data, contig 2.5. (361 aa)
SMAC_03085Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (888 aa)
SMAC_03522WGS project CABT00000000 data, contig 2.9. (441 aa)
SMAC_03713Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (480 aa)
SMAC_03290Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (856 aa)
SMAC_03341WGS project CABT00000000 data, contig 2.10. (489 aa)
SMAC_04456WGS project CABT00000000 data, contig 2.14. (603 aa)
SMAC_04139WGS project CABT00000000 data, contig 2.15. (490 aa)
SMAC_04515WGS project CABT00000000 data, contig 2.20. (875 aa)
SMAC_02293WGS project CABT00000000 data, contig 2.23; Belongs to the glycosyl hydrolase 1 family. (476 aa)
SMAC_05638WGS project CABT00000000 data, contig 2.30. (734 aa)
SMAC_07643Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (550 aa)
SMAC_06603WGS project CABT00000000 data, contig 2.37. (390 aa)
SMAC_06604WGS project CABT00000000 data, contig 2.37. (469 aa)
SMAC_08072WGS project CABT00000000 data, contig 2.50. (885 aa)
SMAC_08511Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (979 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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