STRINGSTRING
SMAC_00212 SMAC_00212 SMAC_02388 SMAC_02388 SMAC_12755 SMAC_12755 SMAC_01357 SMAC_01357 SMAC_01814 SMAC_01814 SMAC_01882 SMAC_01882 SMAC_01953 SMAC_01953 SMAC_05789 SMAC_05789 SMAC_03604 SMAC_03604 SMAC_04155 SMAC_04155 SMAC_04065 SMAC_04065 SMAC_04779 SMAC_04779 SMAC_02210 SMAC_02210 SMAC_05910 SMAC_05910 SMAC_06340 SMAC_06340 SMAC_06408 SMAC_06408 SMAC_07053 SMAC_07053
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAC_00212Succinate-semialdehyde dehydrogenase. (537 aa)
SMAC_02388WGS project CABT00000000 data, contig 2.3. (318 aa)
SMAC_12755Glutamate decarboxylase; Belongs to the group II decarboxylase family. (617 aa)
SMAC_01357Glutamate decarboxylase; Belongs to the group II decarboxylase family. (619 aa)
SMAC_01814Acetolactate synthase. (689 aa)
SMAC_01882WGS project CABT00000000 data, contig 2.5. (689 aa)
SMAC_01953WGS project CABT00000000 data, contig 2.5; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (516 aa)
SMAC_05789WGS project CABT00000000 data, contig 2.6; Belongs to the thiolase-like superfamily. Thiolase family. (383 aa)
SMAC_03604Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. (559 aa)
SMAC_04155WGS project CABT00000000 data, contig 2.15. (407 aa)
SMAC_04065WGS project CABT00000000 data, contig 2.17. (772 aa)
SMAC_04779WGS project CABT00000000 data, contig 2.21; Belongs to the thiolase-like superfamily. Thiolase family. (430 aa)
SMAC_02210WGS project CABT00000000 data, contig 2.23; Belongs to the enoyl-CoA hydratase/isomerase family. (300 aa)
SMAC_05910Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. (516 aa)
SMAC_063403-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (454 aa)
SMAC_06408WGS project CABT00000000 data, contig 2.35. (546 aa)
SMAC_07053WGS project CABT00000000 data, contig 2.36. (316 aa)
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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