STRINGSTRING
AFG35103.1 AFG35103.1 AFG35200.1 AFG35200.1 AFG35317.1 AFG35317.1 AFG35320.1 AFG35320.1 AFG35321.1 AFG35321.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFG35103.1PFAM: Ribose/Galactose Isomerase. (145 aa)
AFG35200.1PFAM: Ribulose-phosphate 3 epimerase family; Belongs to the ribulose-phosphate 3-epimerase family. (217 aa)
AFG35317.1Sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/Galactose Isomerase. (160 aa)
AFG35320.1Transketolase, alpha subunit; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain. (322 aa)
AFG35321.1Transketolase, beta subunit; PFAM: Transketolase, thiamine diphosphate binding domain. (291 aa)
Your Current Organism:
Fervidobacterium pennivorans
NCBI taxonomy Id: 771875
Other names: F. pennivorans DSM 9078, Fervidobacterium pennivorans DSM 9078, Fervidobacterium pennivorans str. DSM 9078, Fervidobacterium pennivorans strain DSM 9078
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