STRINGSTRING
AFG34850.1 AFG34850.1 AFG34851.1 AFG34851.1 AFG35174.1 AFG35174.1 AFG35175.1 AFG35175.1 AFG35176.1 AFG35176.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFG34850.1Transposase; PFAM: Integrase core domain. (400 aa)
AFG34851.1DNA replication protein; PFAM: IstB-like ATP binding protein. (254 aa)
AFG35174.1Hypothetical protein. (527 aa)
AFG35175.1Transposase; PFAM: Integrase core domain. (400 aa)
AFG35176.1DNA replication protein; PFAM: IstB-like ATP binding protein. (254 aa)
Your Current Organism:
Fervidobacterium pennivorans
NCBI taxonomy Id: 771875
Other names: F. pennivorans DSM 9078, Fervidobacterium pennivorans DSM 9078, Fervidobacterium pennivorans str. DSM 9078, Fervidobacterium pennivorans strain DSM 9078
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