Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFG34403.1 | AFG35188.1 | Ferpe_0257 | Ferpe_1083 | Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; PFAM: Acetyltransferase (GNAT) family; Aminotransferase class I and II. | PFAM: Aminotransferase class I and II. | 0.929 |
| AFG34403.1 | AFG35627.1 | Ferpe_0257 | Ferpe_1560 | Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; PFAM: Acetyltransferase (GNAT) family; Aminotransferase class I and II. | PFAM: Aminotransferase class I and II. | 0.926 |
| AFG34456.1 | AFG34484.1 | Ferpe_0315 | Ferpe_0343 | PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Transcriptional regulator with HTH domain and aminotransferase domain; PFAM: Aminotransferase class I and II. | 0.406 |
| AFG34456.1 | AFG35188.1 | Ferpe_0315 | Ferpe_1083 | PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | PFAM: Aminotransferase class I and II. | 0.415 |
| AFG34456.1 | AFG35694.1 | Ferpe_0315 | Ferpe_1636 | PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | 0.440 |
| AFG34456.1 | AFG35763.1 | Ferpe_0315 | Ferpe_1706 | PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase; PFAM: Aminotransferase class I and II. | 0.503 |
| AFG34456.1 | glyA | Ferpe_0315 | Ferpe_0323 | PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glycine/serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.453 |
| AFG34483.1 | AFG34484.1 | Ferpe_0342 | Ferpe_0343 | Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase; PFAM: Aminotransferase class-V. | Transcriptional regulator with HTH domain and aminotransferase domain; PFAM: Aminotransferase class I and II. | 0.519 |
| AFG34483.1 | glyA | Ferpe_0342 | Ferpe_0323 | Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase; PFAM: Aminotransferase class-V. | Glycine/serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.938 |
| AFG34484.1 | AFG34456.1 | Ferpe_0343 | Ferpe_0315 | Transcriptional regulator with HTH domain and aminotransferase domain; PFAM: Aminotransferase class I and II. | PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.406 |
| AFG34484.1 | AFG34483.1 | Ferpe_0343 | Ferpe_0342 | Transcriptional regulator with HTH domain and aminotransferase domain; PFAM: Aminotransferase class I and II. | Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase; PFAM: Aminotransferase class-V. | 0.519 |
| AFG35188.1 | AFG34403.1 | Ferpe_1083 | Ferpe_0257 | PFAM: Aminotransferase class I and II. | Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; PFAM: Acetyltransferase (GNAT) family; Aminotransferase class I and II. | 0.929 |
| AFG35188.1 | AFG34456.1 | Ferpe_1083 | Ferpe_0315 | PFAM: Aminotransferase class I and II. | PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.415 |
| AFG35188.1 | AFG35627.1 | Ferpe_1083 | Ferpe_1560 | PFAM: Aminotransferase class I and II. | PFAM: Aminotransferase class I and II. | 0.919 |
| AFG35188.1 | gcvPA | Ferpe_1083 | Ferpe_1085 | PFAM: Aminotransferase class I and II. | Glycine cleavage system protein P; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.704 |
| AFG35188.1 | gcvPB | Ferpe_1083 | Ferpe_1084 | PFAM: Aminotransferase class I and II. | Glycine cleavage system protein P; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. | 0.725 |
| AFG35627.1 | AFG34403.1 | Ferpe_1560 | Ferpe_0257 | PFAM: Aminotransferase class I and II. | Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; PFAM: Acetyltransferase (GNAT) family; Aminotransferase class I and II. | 0.926 |
| AFG35627.1 | AFG35188.1 | Ferpe_1560 | Ferpe_1083 | PFAM: Aminotransferase class I and II. | PFAM: Aminotransferase class I and II. | 0.919 |
| AFG35694.1 | AFG34456.1 | Ferpe_1636 | Ferpe_0315 | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.440 |
| AFG35694.1 | gcvPA | Ferpe_1636 | Ferpe_1085 | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | Glycine cleavage system protein P; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.921 |
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