(30 nodes) Cadherin repeats., and Adherens junction network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Tcf/lef	HMG box domain-containing protein. (351 aa)
	F6R8A8_CIOIN	Uncharacterized protein. (953 aa)
	LOC100186942	Leukocyte cell-derived chemotaxin 1. (350 aa)
	F6XHP5_CIOIN	Uncharacterized protein. (468 aa)
	F6TA08_CIOIN	Ras-associating domain-containing protein. (247 aa)
	F6URN5_CIOIN	Uncharacterized protein. (1180 aa)
	F6YY38_CIOIN	Uncharacterized protein. (2620 aa)
	ci-cadherin	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (798 aa)
	F7AFJ0_CIOIN	Uncharacterized protein. (926 aa)
	Cibeta-catenin	Uncharacterized protein. (497 aa)
	F7BCU9_CIOIN	Uncharacterized protein. (165 aa)
	F6YND7_CIOIN	PDZ domain-containing protein. (226 aa)
	F6Q5K0_CIOIN	Uncharacterized protein. (899 aa)
	LOC100178377	Catenin delta-1 isoform X1. (869 aa)
	F7ADT8_CIOIN	Uncharacterized protein. (671 aa)
	LOC100185362	LHFPL tetraspan subfamily member 2a protein-like. (230 aa)
	LOC100175475	Uncharacterized protein LOC100175475 isoform X2. (654 aa)
	F6XAX3_CIOIN	Uncharacterized protein. (150 aa)
	F6TZA7_CIOIN	Uncharacterized protein. (273 aa)
	F6ZAE8_CIOIN	Uncharacterized protein. (242 aa)
	F6U799_CIOIN	LAM_G_DOMAIN domain-containing protein. (169 aa)
	F6S6V0_CIOIN	CA domain-containing protein. (197 aa)
	H2XJR4_CIOIN	Uncharacterized protein. (241 aa)
	H2XKU5_CIOIN	Uncharacterized protein. (147 aa)
	H2XLW5_CIOIN	Dilute domain-containing protein. (191 aa)
	LOC100184127	cadherin-2B isoform X3. (399 aa)
	LOC100184799	Tyrosine-protein kinase. (508 aa)
	H2XSQ5_CIOIN	Uncharacterized protein. (939 aa)
	H2XVW6_CIOIN	Uncharacterized protein. (490 aa)
	H2XX29_CIOIN	EGF-like domain-containing protein. (224 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cibeta-catenin	F6Q5K0_CIOIN	ENSCINP00000014417	ENSCINP00000018199	Uncharacterized protein.	Uncharacterized protein.	0.967
Cibeta-catenin	F6S6V0_CIOIN	ENSCINP00000014417	ENSCINP00000028183	Uncharacterized protein.	CA domain-containing protein.	0.548
Cibeta-catenin	F6TA08_CIOIN	ENSCINP00000014417	ENSCINP00000008046	Uncharacterized protein.	Ras-associating domain-containing protein.	0.496
Cibeta-catenin	F6TZA7_CIOIN	ENSCINP00000014417	ENSCINP00000025972	Uncharacterized protein.	Uncharacterized protein.	0.963
Cibeta-catenin	F6XAX3_CIOIN	ENSCINP00000014417	ENSCINP00000025861	Uncharacterized protein.	Uncharacterized protein.	0.442
Cibeta-catenin	F6XHP5_CIOIN	ENSCINP00000014417	ENSCINP00000007634	Uncharacterized protein.	Uncharacterized protein.	0.700
Cibeta-catenin	F6YY38_CIOIN	ENSCINP00000014417	ENSCINP00000012277	Uncharacterized protein.	Uncharacterized protein.	0.623
Cibeta-catenin	H2XJR4_CIOIN	ENSCINP00000014417	ENSCINP00000029896	Uncharacterized protein.	Uncharacterized protein.	0.442
Cibeta-catenin	H2XKU5_CIOIN	ENSCINP00000014417	ENSCINP00000030277	Uncharacterized protein.	Uncharacterized protein.	0.692
Cibeta-catenin	H2XX29_CIOIN	ENSCINP00000014417	ENSCINP00000034213	Uncharacterized protein.	EGF-like domain-containing protein.	0.623
Cibeta-catenin	LOC100178377	ENSCINP00000014417	ENSCINP00000019142	Uncharacterized protein.	Catenin delta-1 isoform X1.	0.692
Cibeta-catenin	Tcf/lef	ENSCINP00000014417	ENSCINP00000004053	Uncharacterized protein.	HMG box domain-containing protein.	0.998
Cibeta-catenin	ci-cadherin	ENSCINP00000014417	ENSCINP00000013407	Uncharacterized protein.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.912
F6Q5K0_CIOIN	Cibeta-catenin	ENSCINP00000018199	ENSCINP00000014417	Uncharacterized protein.	Uncharacterized protein.	0.967
F6Q5K0_CIOIN	F6S6V0_CIOIN	ENSCINP00000018199	ENSCINP00000028183	Uncharacterized protein.	CA domain-containing protein.	0.529
F6Q5K0_CIOIN	F6TZA7_CIOIN	ENSCINP00000018199	ENSCINP00000025972	Uncharacterized protein.	Uncharacterized protein.	0.967
F6Q5K0_CIOIN	F6XAX3_CIOIN	ENSCINP00000018199	ENSCINP00000025861	Uncharacterized protein.	Uncharacterized protein.	0.503
F6Q5K0_CIOIN	F6XHP5_CIOIN	ENSCINP00000018199	ENSCINP00000007634	Uncharacterized protein.	Uncharacterized protein.	0.723
F6Q5K0_CIOIN	F6YY38_CIOIN	ENSCINP00000018199	ENSCINP00000012277	Uncharacterized protein.	Uncharacterized protein.	0.649
F6Q5K0_CIOIN	H2XJR4_CIOIN	ENSCINP00000018199	ENSCINP00000029896	Uncharacterized protein.	Uncharacterized protein.	0.503